Gene Fjoh_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1200 
Symbol 
ID5089745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1364768 
End bp1365706 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content37% 
IMG OID644740602 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001193551 
Protein GI146298960 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAA AAATATTAAT CATTGGTGCC TGTGGGCAGA TTGGCACTGA GCTTACTCAA 
AAACTTCGCA AATTATACGG GACCGAAAAT GTCATTGCAT CTGATATTCG AAAATTAAAT
ACGGATGTGG TTAATTCCGG ACCTTTTGAA GTGGTAAATG CTTTAGATTT TAACCAGATT
GAACATCTTG TTGAAGTTCA TAAAATTACT GATGTTTATT TGATGGCTGC GCTTTTATCT
GCAACTGCTG AAAAAAATCC GGCTTTTGCG TGGGACTTAA ATATGAATTC GCTTTTTCAT
GTTTTGAATT TAGCGAAAGC CAAAAAAATT CAAAAGATTT TCTGGCCTTC GAGTATTGCG
GTTTTTGGAC CGACAACTCC AAAAGAAAAT ACGCCTCAAT ATACGATTAT GGAGCCTTCT
ACGGTTTACG GAATCAGTAA ACAATCTGGC GAAAGATGGT GCGAATACTA TCATAATATT
TATGGTGTTG ATGTTCGAAG CATACGTTAT CCTGGTTTAA TAAGCTGGTC GACTCCTCCG
GGCGGCGGTA CTACAGATTA TGCAGTTGAT ATTTTCTACA AAGCAATCGC AGATAAAAAA
TACGAATGCT TTTTGTCGTC TGAAACCAAA ATGCCAATGA TGTATATGGA TGATGCAATC
GATGCGACGA TTAATATTAT GAAAGCTCCT GTTGAGCAGA TCAAAATACA TTCTTCTTAT
AATTTAGCGG CAATGAGTTT TACTCCAACT GAAATTGCTG CCGAAATTAA AAAGCATATT
CCTGAATTTG AAATTACCTA CAATCCAGAT TTCCGTCAGA AAATTGCAGA CAGCTGGCCG
GCAAGTATCG ACGACAGTTC TGCAAGAGAA GACTGGGGAT GGAATCATAA ATTTGATCTG
GAATCGATGA CAAAAGATAT GATTGAACAT TTGAGTTAA
 
Protein sequence
MNPKILIIGA CGQIGTELTQ KLRKLYGTEN VIASDIRKLN TDVVNSGPFE VVNALDFNQI 
EHLVEVHKIT DVYLMAALLS ATAEKNPAFA WDLNMNSLFH VLNLAKAKKI QKIFWPSSIA
VFGPTTPKEN TPQYTIMEPS TVYGISKQSG ERWCEYYHNI YGVDVRSIRY PGLISWSTPP
GGGTTDYAVD IFYKAIADKK YECFLSSETK MPMMYMDDAI DATINIMKAP VEQIKIHSSY
NLAAMSFTPT EIAAEIKKHI PEFEITYNPD FRQKIADSWP ASIDDSSARE DWGWNHKFDL
ESMTKDMIEH LS