Gene Fjoh_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1188 
Symbol 
ID5089733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1340181 
End bp1344350 
Gene Length4170 bp 
Protein Length1389 aa 
Translation table11 
GC content30% 
IMG OID644740590 
Producthypothetical protein 
Protein accessionYP_001193539 
Protein GI146298948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AACTACTCTT ATTGCTATTA TTAGCAAGCT TTTCTATTCA TGCCCAACAA 
TACACTTCTA TTCCTGATGT GAATTTTGAA AACAAGCTGA TTAGCCTGGG TATCGATTCT
GGTGCTCCCG ATGGGAGGGT TCTAACATCC AATGTAGCTT CTATAATTTA TTTATATGTT
GATACAAGTT CGATTACAGA CCTCACCGGT ATTGAAGATT TTATATCTTT AAAAGAGTTA
AAGTGTTCCT CAAATCGATT GACACAGTTA AATCTGTCTA AAAACAGAGC TTTAACCTCT
TTAGAATGCA GTAACAATCT ATTAACTGCA TTGGACATAT CCAATAATCC ATTACTGCTG
AAATTAGACT GCTCTCAAAA TAAACTTACA GCACTTGATT TTTCTAATAA CACGGCACTT
AAAACTATTT ATTGCTCCAG TAATCAACTT ACAGCGTTAA ATGTTTCTAA GCAGTTAATG
CTGGAGCAAT TTTTTTGTTA TACCAATAAA ATCGAAATTC TTGATTTGTC TTCTAATGTG
AATTTGTCTG GCTTAGCATG TCACACTAAT CTGCTAAAGA ATCTTGACCT AAGCAAAAAT
ACTAAAGTCC ATTATGTACA AGCTCATAAC AATCCTTTAA TCAGTTTCAA TATCCAAAAT
GGTACAAACT ATTTGTTTGA TGCACCTCTT TCTACATTAA CCTTCAACAG TCCAAATCTA
AAATGTGTTC AGGTTGATAA TGTCGAAGAA GCAAATGTTC GCTGGGCCAG TGTAAAAGGA
GATGTACAAT ACAGTACATA TTGTTCTCCA TATACGACAA TTCCTGATAT CAATTTTGAA
AAAAAACTAA TTGCTTTGGG TATTGACAAG GATGGTGAAA ATGGTAAAGT TCTAACAGCA
GATATTACCT CTATAACTTC TCTTAATGTA TCAAATAGTT CCATTTCTGA TCTGACTGGC
ATTCAAGACT TTCACAATTT GACCAATTTA TCCTGTGACG GAAACCTACT TGTCACTCTG
GATATTACCA AAAACGTTTA TTTAACAGAT TTAAACTGTA ATCAAAATAA AATAACAGCT
CTAAATCTGT CTAATAATAG AGCCCTAAAA ACGCTATACT GCTCTTCCAA TCAATTGACA
AAAATTGACT TGTCTTATAA TAGTTCTTTG CAGGTTTTGG ACATCAGCCA AAATAAACTT
GATAAGTTAG AAGTAAACCA CAATGGAGCA TTAACTTCTT TAAAATTAGA TGAAAATTTA
ATAACAAGTT TAGATTTATT AAACAATAGA GCATTAACAA CTTTATCTTT AGAGAAAAAT
AAATTAGCAA TTTTAAATCT TACTAATAAT ACTTTACTTA CCAATGCAGT CTCTTTTAAA
TCAAATCCAG AATTGTATTG CGTTCAGGTT AGTGACTTAG CATTTGCAAA CACAAATTGG
TTCGATAAAA AAGACCCAAT GACATCATTT TCGTCAACTG CTTGTTTACT CTTAGAATAT
TTTACCTTAA TTCCCGATAG TAATTTCGAA AACAAACTGA TTAGTTTGGG TATAGAATCA
GGAACTGCCG ATGGAAAAAT TTTAACTTCT AAAGTAGCTT CTTTGACTTC TCTGAATGTA
TCACAAAGCT CCATTTCAAA TCTTACCGGA ATTGAAGCTT TTGTTGCTTT AAAAACTTTA
AATTGTTCGA ACAATCGACT GACTCAATTA AATGTGTCTA AAAACACTTT ACTAACCTCT
TTAGAATGCA ATAATAATCA GTTAACCGCA CTGAATCTGT CTAATAATTC AGCGTTACTG
ACATTGGAAG TTTCTAACAA TAATATATTT GGACTTGATT TTTCTAATAA CACAGCACTT
AAATCCATTA GATGCTACAA CAATTTTATT TCTAATATAA ATGTTTCTAA ACAATTAGCA
TTAGAAAGTC TGGATTTTGG TTATAACAGA GTACAAAATA TCGACCTGTC TTTCAATGTA
AATCTGCAGT CTCTGCTCTG TAATGCTAAT AGCTTACAAA GTCTTGATTT AAGTAAAAAT
AACAAATTGA CTACTATGGT TGCCAATATT AACAGCCTAA GTAGTTTAAA TATCAAAAAT
GGAGCAAATA ATCTATTCTA TAATTCCGGT TCCCTCATAC GCTTTGATAA TAATGATTAT
CTGGCATGTA TTCAGGTCGA CAATGTAGAA GAAGCAAATG CACGCTGGTC AAACCAAAAA
AACCCAAAAG CAAGTTTTAG TACAGATTGC AGACCTTATA CTTTAATTCC TGATCTCAAT
TTTGAAAATA AATTAATTAG TTTAGGAATC GACTCAGGAT CTCCAGATGG AAAAGTTTTA
ACCACAAATA TTGCTTCTAT AGCTAACTTA GACCTTACAG ATTCTTCTAT TAAAGACCTA
ACGGGAATTG AAGATTTTAG AGAATTAACA GGACTCTATG CAAATAAAAA TCAAATAACA
ACATTAGATC TTTCTTCAAA TCCAAAATTA ACCTCATTAC TTGTTAGAGA AAATAAATTG
GAAAATGTAA ATGTTAGAGA AAATACTCAA TTAACCAATT TATCAATTGG AAAAAATAAA
TTAACGACAC TAGATCTAAG TCAAAATACA AAATTAACTT CTTTAAATGC AGAGTATAAC
AACTTAACAA CTTTAGACTT ATCTAACAAC AAACTGTTAT ATGTTACAAA TCTTACATAT
AATCAATTAA CAACTTTAGA TTTATCTAAA AATACTATTC TGGAATATCT GCAATGTGGT
AATAACAAAT TGACAAGTTT AAACATCAAA AATGCTTCGA TTCTCTCTAT GTTAGAATGT
CAGCAAAATT TATTGACTTC CTTAGATTTA TCAGACAATA TTGCTTTAAG AAATTTGATC
TGTTCAAAAA ATGCTTTAAC AAGTCTTAAT ACTGCAAATA ATATACAATT AGGTTCTATA
GATTGTTCTG AAAACAATCT TACCTCTCTT GATCTTTTAA AGAACATTAA CTTATATTCT
TTATATTGCG ATGTAAATCA ATTGACAGCT TTAAATGTAT CAAAAAACAT ATTGCTCTCA
TCCTTAAGTG TTTACGGCAA TTCTTTGACA ACTCTTGATG TTTCAAAAAA TACTGAATTG
AATACTTTTT ATTGTTATTC TAATCTATTA ACAAGCATTG ATATTTCTAG CAATACGAAA
ATAACTCGTT TACAGGTCGA TCTAAACAAC TTAACATCAT TGAATCTAAA AAACGGAAAT
AACACTATAT TAGACCGCAA GTATACAAAT TTCAACAATA ACCCAGATTT AACTTGTATC
CTTGTTGATG ACGTTACTTA TTCTAATGCA AATTGGGCAC ATCTAAAAGA TGCAGCAGCA
AAATACAGTC TAGATTGTTC TATTGAATTT GTTCAAATCT CAGATTCAAA TTTTGAACAA
AAACTAATTG ATTTAGGAAT AGATACTGAT GGTTTAAACG GAAAAATTAC GATTGCAGAT
GCAAGTGCTG TTACTACTTT AGATCTTTCA AACAGCAGTA TTAAAGATCT AACAGGGATT
GAATATTTTA CCTCTTTAAC CTATTTAGAT GTCAGCAGTA ACCAATTGAC AACTTTAAAT
GTAAGCAAGA ATATTAAATT AGAAACATTA AACGCTTCTT CAAATCAGCT TACCACGATA
GATTTATCAA ATAATACTAA GCTCAGAATT GTGTATGTAG TTAACAATCC ACTGGTTTCA
TTAAATCTGC GAAACGGAAA CAATGCAAAC TTTATTCTGC CATCAAATAC TGGTAAATCT
GCATCTGGTT TATACACTAC ATTTTTAGGA CTTAAAACTC TTGGCTGTAT ACAAGTTGAT
AATGAGGCTT ATTCGAACGC AAATTGGTCA AACATCAAAG AATCAACTAC CACCTATTCA
AATACTTGTA AGACTCTAAG TGTTCCAGAA TCTGCTATTA ATAATGTTGT TATACATCCA
AACCCAACCA AAGGCGAATT AAACATTAAA AATGTAAACC TGGAAAAAGC AAATGTTTAT
AATGTTTTAG GACAGCTTGT AAAATCATTT ACACTAAACT CAAATAACAC AGATAACACA
ATCAATTTAT CTGGATTACC AAAAGGAGTT TACTATGTGT ATTTAATCAA TCAGGATACA
GCTTCGGCTA AAAAAGTGAT TGTAGAATAA
 
Protein sequence
MKTKLLLLLL LASFSIHAQQ YTSIPDVNFE NKLISLGIDS GAPDGRVLTS NVASIIYLYV 
DTSSITDLTG IEDFISLKEL KCSSNRLTQL NLSKNRALTS LECSNNLLTA LDISNNPLLL
KLDCSQNKLT ALDFSNNTAL KTIYCSSNQL TALNVSKQLM LEQFFCYTNK IEILDLSSNV
NLSGLACHTN LLKNLDLSKN TKVHYVQAHN NPLISFNIQN GTNYLFDAPL STLTFNSPNL
KCVQVDNVEE ANVRWASVKG DVQYSTYCSP YTTIPDINFE KKLIALGIDK DGENGKVLTA
DITSITSLNV SNSSISDLTG IQDFHNLTNL SCDGNLLVTL DITKNVYLTD LNCNQNKITA
LNLSNNRALK TLYCSSNQLT KIDLSYNSSL QVLDISQNKL DKLEVNHNGA LTSLKLDENL
ITSLDLLNNR ALTTLSLEKN KLAILNLTNN TLLTNAVSFK SNPELYCVQV SDLAFANTNW
FDKKDPMTSF SSTACLLLEY FTLIPDSNFE NKLISLGIES GTADGKILTS KVASLTSLNV
SQSSISNLTG IEAFVALKTL NCSNNRLTQL NVSKNTLLTS LECNNNQLTA LNLSNNSALL
TLEVSNNNIF GLDFSNNTAL KSIRCYNNFI SNINVSKQLA LESLDFGYNR VQNIDLSFNV
NLQSLLCNAN SLQSLDLSKN NKLTTMVANI NSLSSLNIKN GANNLFYNSG SLIRFDNNDY
LACIQVDNVE EANARWSNQK NPKASFSTDC RPYTLIPDLN FENKLISLGI DSGSPDGKVL
TTNIASIANL DLTDSSIKDL TGIEDFRELT GLYANKNQIT TLDLSSNPKL TSLLVRENKL
ENVNVRENTQ LTNLSIGKNK LTTLDLSQNT KLTSLNAEYN NLTTLDLSNN KLLYVTNLTY
NQLTTLDLSK NTILEYLQCG NNKLTSLNIK NASILSMLEC QQNLLTSLDL SDNIALRNLI
CSKNALTSLN TANNIQLGSI DCSENNLTSL DLLKNINLYS LYCDVNQLTA LNVSKNILLS
SLSVYGNSLT TLDVSKNTEL NTFYCYSNLL TSIDISSNTK ITRLQVDLNN LTSLNLKNGN
NTILDRKYTN FNNNPDLTCI LVDDVTYSNA NWAHLKDAAA KYSLDCSIEF VQISDSNFEQ
KLIDLGIDTD GLNGKITIAD ASAVTTLDLS NSSIKDLTGI EYFTSLTYLD VSSNQLTTLN
VSKNIKLETL NASSNQLTTI DLSNNTKLRI VYVVNNPLVS LNLRNGNNAN FILPSNTGKS
ASGLYTTFLG LKTLGCIQVD NEAYSNANWS NIKESTTTYS NTCKTLSVPE SAINNVVIHP
NPTKGELNIK NVNLEKANVY NVLGQLVKSF TLNSNNTDNT INLSGLPKGV YYVYLINQDT
ASAKKVIVE