Gene Fjoh_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1168 
Symbol 
ID5089714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1319676 
End bp1322495 
Gene Length2820 bp 
Protein Length939 aa 
Translation table11 
GC content35% 
IMG OID644740571 
ProductTonB-dependent receptor 
Protein accessionYP_001193520 
Protein GI146298929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA AATACGCAGT CTTCCTTATT TTATGGTCTT TTAATCTGGC ATTTGCACAG 
CAGGAAATAA CAGTGACGGG AATTGTTATT GACGCCCGCA CACAAAATCC GCTGGAAAAT
GTAGTGGTAA CTATACAGAA TACAGCAGTA ATGCAGCTTA CTTCCAAAAA AGGAAAATTT
GAGCTTCATG TATTTCCAAC TAAAGAAAAA CTGCTTTTGC TGAGAAGTCA GGGGTACAAA
GATTTACTTT TAAAACTTCA ATACAATTCA GGAGAAAATA TAAATCTTGG TATTTTGCAA
TTAGAAGATA CTTATACAGA TGAAGTTCCT GCTGCCTTGA TTACTTTGTC AGATAATGAT
TTTTCTGATG ATAACAGCTC TTCAGAAATG ACATCGGGTT TATTGCAGTC TTCAAGAGAT
GCTTTTATGC AGGCGTCGGC ATTTAACTGG GGTCAGGCCC GATTTAGAAT GCGCGGTCTC
GACAGCGAGA ACGGAACGAT GATGCTCAAC GGTATGACCA TGAATAAAAT CTACGATGGC
AGACCACAAT GGAACAATTG GGGCGGATTA AATAATGTAC TTCGTAATCA GGAATTTTCA
GTTGGAAATG CAGCATCCAA TTATACTTTT GGCGGTGTTT TAGGAACACA GCAAATATTT
ACACAAGCTT CTTTATATCG AAAAGGTACA CAGCTTACCT TTTCAGGAAG TAATGCCTCT
TACACTCTGC GTGCTATAGG AACGTATGCT TCAGGAATGA GTACTTCGGG CTGGGCTTAT
GTGGTTTCTG CCGGTAAAAG ATGGGCAGAC GAAGGTTACT TTGAAGGAAC AAATTTCGAT
GCCGATTCCT TTTTTATGAC TGTTGAAAAG AAACTAAATA GCAAACATTC AATCAATTTT
ACCGGATTTT ACACGCCGAA TTCACGTGGA AAAAATTCTC CAAATACAAA CGAAGTGACA
GCTTTGATGG GAGAAAAGTA CAATTCATAC TGGGGGTTTC AGAACGGAAA AAGACGAAAT
GCAAGAGTAA AAAAGGTAGA AGAGCCTTTG TTTATGCTGA ATCACTATTT TAAAATAGAT
GAGAAAACAA AGCTGAATTC AGGTGTAATG TATCAATTTG GAAAAGTTGG AAACAGCAAT
ATTGATTATC AAAATGCTGA CAGTCCAGAT CCGGTTTACT ATCGAAAAAT GCCAAGTTAT
TTTAGTTCAC TTTATGGAAA AGACAAAGGT GAATTTTCTG GAGACTTTAC TCCGGATTAT
GAAAATGCAG ACAAAAGCAG AACGACATTT TTAGCCAATT CCCAAATTGA TTGGAACGCC
ATGTATCTGG CCAATCAAAA ATCAGGTCAA AACGGTTACG AACCTTCGCA GAGTCATTAT
GTTTTATATG AAGACAGAAC CGATGATAAA ACTTTTGCAG TAAATTCTAA CTTAAATACG
CAGCTTACTC CAAATATTTC TTTTGATGGA GGAGTTATGT ATCGAAATTT AAAATCACAT
AATTTTCAAT ACTTACTGGA TCTTCTTGGC GGAAAATATT TCGAAGATAT TGATCCGTTT
TATAAAGGAG ACCTTTCTCA ATCTGATTTA CAAAATCCAA ACAGACAGGT AAAAGAAGGA
GATATTTACG GTTACAATTA TAATTTTTCA GCCAATACAA TTGATGTTTT TACACAGTTT
AAATTTTCAT ATAATAAAAC CGAATTTTAT TTGGCTCAAT CTTATTCAAT GTCAAATTAT
CAAAGAGAAG GTTTATACCA AAACGGACTT TATCCAACAG CATCTTTAGG GAAAAGTGAA
AAAGTAAACT TTGAGAATTT TGGCTTTAAA GGCGGATTCG TCTATAAGGT TTCAGGTAAA
CAATGGCTGT TTTTTAATGC AGCACATTTA ACAAGAGCGC CTTCACTTCG AAATACATTT
GCAAATTCAC GCTTAAATAA TAATGTAGTA AATGGAATTG AAAGTGAAAA TGTTACCAGC
GCTGAGGCGA ATTATGTCTA TAGTTCTCCA AAACTTAAAT TAAGGTTAAC GGCTTATTAC
ACTTTAATTA AAAATTCTTC AAAAACGTCT TTTTTCTATG CCGAAGGAAT TTTTGATAAC
GGAGCCGGAT ATGATCCAAC AGACGCTTTT GTAAGTCAGA CTTTGACAAA ATTGGACAAG
AAAAATACTG GTGCAGAATT GAGTTTTGAA TATCAGATTA CATCTACTTT AAAATCAACT
TTAAGTGCTG CTTACGGAAA TTATATTTAC AACAGCAATC CAAATGTTTC GATTACAAAT
GATGCAAATG CATCAAAAGA TGGAGTACAG ACTACTTTTG ATTTTGGCAA AGCTTATCTT
AAAAACTACA AACAGTCCGG AACACCGCAA AATGCACTTT CGTTGGGGTT GGAATACCGT
GACCCTAAAT TTTGGTGGAT TGGAACCAAT ATTAACTATT TGACAGATAA TTATATTGAT
GTTTCGCCTA TTTCCAGAAC CTCTCAATTT TACATTAATC CGGCAAACGG ATTTCCTTTT
CCTGAAGCAT CTTCTGAAAG AGGAAATGAA TTGTTGAAAC AAGAAAAATT TGACCCTGTA
ACCTTATTAA ATATCAATGG AGGAAAATCA TGGAGAGTTC ATAAAAAGTA CATTGGTCTT
TTTGCCAGCG TTAATAATGT TTTGAATGCA ATATATAAAA CCGGTGGCTT TGAACAGGCG
AGAAATGCCA ATTTTAGAGC TTTAAACCAA GATGTATCAA GCGGAACACC TTCATTTGGA
CCCAAATATT ATTACGGTTA CGGAAGAACT TATTTTTTAA ATCTTACTAT CGGTTTATAA
 
Protein sequence
MVKKYAVFLI LWSFNLAFAQ QEITVTGIVI DARTQNPLEN VVVTIQNTAV MQLTSKKGKF 
ELHVFPTKEK LLLLRSQGYK DLLLKLQYNS GENINLGILQ LEDTYTDEVP AALITLSDND
FSDDNSSSEM TSGLLQSSRD AFMQASAFNW GQARFRMRGL DSENGTMMLN GMTMNKIYDG
RPQWNNWGGL NNVLRNQEFS VGNAASNYTF GGVLGTQQIF TQASLYRKGT QLTFSGSNAS
YTLRAIGTYA SGMSTSGWAY VVSAGKRWAD EGYFEGTNFD ADSFFMTVEK KLNSKHSINF
TGFYTPNSRG KNSPNTNEVT ALMGEKYNSY WGFQNGKRRN ARVKKVEEPL FMLNHYFKID
EKTKLNSGVM YQFGKVGNSN IDYQNADSPD PVYYRKMPSY FSSLYGKDKG EFSGDFTPDY
ENADKSRTTF LANSQIDWNA MYLANQKSGQ NGYEPSQSHY VLYEDRTDDK TFAVNSNLNT
QLTPNISFDG GVMYRNLKSH NFQYLLDLLG GKYFEDIDPF YKGDLSQSDL QNPNRQVKEG
DIYGYNYNFS ANTIDVFTQF KFSYNKTEFY LAQSYSMSNY QREGLYQNGL YPTASLGKSE
KVNFENFGFK GGFVYKVSGK QWLFFNAAHL TRAPSLRNTF ANSRLNNNVV NGIESENVTS
AEANYVYSSP KLKLRLTAYY TLIKNSSKTS FFYAEGIFDN GAGYDPTDAF VSQTLTKLDK
KNTGAELSFE YQITSTLKST LSAAYGNYIY NSNPNVSITN DANASKDGVQ TTFDFGKAYL
KNYKQSGTPQ NALSLGLEYR DPKFWWIGTN INYLTDNYID VSPISRTSQF YINPANGFPF
PEASSERGNE LLKQEKFDPV TLLNINGGKS WRVHKKYIGL FASVNNVLNA IYKTGGFEQA
RNANFRALNQ DVSSGTPSFG PKYYYGYGRT YFLNLTIGL