| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1149 |
|---|
| Symbol | |
|---|
| ID | 5089695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1298090 |
|---|
| End bp | 1299277 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644740550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001193501 |
|---|
| Protein GI | 146298910 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATA TACATTCAGA TTCTTCTATA AAAAACAGAA AACTTTTGCA GCAAATCGTT
TTTGTTGCTG CTTTTTTCCT TTTTTCTTTT CAAGCCGCCA TTGCACAGAA ACAGCATATA
AGTGTAAAAG ATTCTCTCGA CGGCGCTTTC GATTTAAGCG ATTATATTAT TTATGCACAT
GGTTTTATTG TTGTGCCAAC CATTATTACA GAGCCGGCTT TAGGAAATAT TGGAGGTGCA
GTTGTACCTG TATTTCTAAA AAAACGTCCG CCTGTTGTAG ACGAAAATGG TAAAAAACGA
TTTATAAATC CGGATATAAC CGGGGGAATT GGAATGTATA CCGGAAACAA AAGCTGGATG
GCAGGAGGAT TTCGTTCTGC CACTTTAGTA AAACCCAAAA TTTTATACCG TGTTATGGCA
GGTTATGGCG ACATGAATTT GTCATTTTAT GAAAACAATC TGCCCAACGG AAGCGATCAG
GAATTTAAAC TCAATTTTAA ATCGACAATT TTTTATACAC AATGGCTCAA ACAATTTAGA
AATGCAAAAT GGAGTGCCGG AGTGCAGTAT TTATTTTTAA ATTCTAAAAT TAAACTCCCA
GATATTAACC TCCCGCCGCC ATTTGTAAAA CCGGGCGATA TTAAAAGTAC AGTAAGTCAA
TTTGGAGGAG CTATTCAATT TGACGGACGT GACAATATAT TTACACCAGA CAAAGGAATA
CGGCTTCAGT CAGATTTCTT TTGGTCTGAT GATGCCATTG GGAGCGATTA CGATGCCTGG
CGCGTCAATT TATCGGCAAT AGGATATTAT CCATTAACAA AAAAATTAAT TGGCGGGCTT
AGGGTAGAAG GAGAGCAGGC GTTTGGGAGT CCGCCATTTT ATTTAAGACC CGGAATTAAT
TTAAGAGGAA TTCCCGCGGC ACGTTATCAG GGAAAAACCA GTATTGTTAC CGAAGCCGAA
TTGCGATGGG ATTTGTACCG AAGATGGAGT CTTATGGGTT ACGGCGGACT GGCAAGTGCT
TTTAACAATT GGGATCAGGC TTTTGCTAAA CCAGTCGTGT ACAGTTACGG AACAGGATTT
AGATATTTAC TTGCCCGAAA ATTTAAACTC CGCATGGGTA TCGATGTTGC AAGAGGAAAT
GAAGACTGGG CCTATTATAT TGTATTTGGA AGCAATTGGC TTAGATGA
|
|---|
| Protein sequence | MRNIHSDSSI KNRKLLQQIV FVAAFFLFSF QAAIAQKQHI SVKDSLDGAF DLSDYIIYAH
GFIVVPTIIT EPALGNIGGA VVPVFLKKRP PVVDENGKKR FINPDITGGI GMYTGNKSWM
AGGFRSATLV KPKILYRVMA GYGDMNLSFY ENNLPNGSDQ EFKLNFKSTI FYTQWLKQFR
NAKWSAGVQY LFLNSKIKLP DINLPPPFVK PGDIKSTVSQ FGGAIQFDGR DNIFTPDKGI
RLQSDFFWSD DAIGSDYDAW RVNLSAIGYY PLTKKLIGGL RVEGEQAFGS PPFYLRPGIN
LRGIPAARYQ GKTSIVTEAE LRWDLYRRWS LMGYGGLASA FNNWDQAFAK PVVYSYGTGF
RYLLARKFKL RMGIDVARGN EDWAYYIVFG SNWLR
|
|---|
| |