| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1123 |
|---|
| Symbol | |
|---|
| ID | 5090201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1269518 |
|---|
| End bp | 1272811 |
|---|
| Gene Length | 3294 bp |
|---|
| Protein Length | 1097 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644740523 |
|---|
| Product | PKD domain-containing protein |
|---|
| Protein accession | YP_001193475 |
|---|
| Protein GI | 146298884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TTACGAATCA AAAAAGCAAA TTTAATACAG CAATTTCGTT TTTATTTTTT
CTATTTTTTC AACAGTCATA TGCGCAAATA ACATTGACCA ATAATATTGG GACAACTCTT
GTTAAAACTG ATATGTATTC TTGCAAAGAT GATGAAAGCT GGTCAAGAGT ATTTAAATTA
TCAGATTTTG GTATAAAACC AAATGAACAA TTTATTATTA AATCAGGACA GGTTGGAATT
GCAAAATCGG ATGTTGGTGC AAATTTGTCA TTTTCAGTTT ATATTGTTGA CGACAGATTT
CCTGAGCTTT TTAGAACTTA TTTTGAAAAA CCATTACTTG GATCTAGAGC CCTTATACCA
ACAAAAACCA TTCATGGAAA TCCAGAATTG ATGCAAATAG ATTTTGATGA ACCAATTATT
GTTCCAGCTG GAGTTGAAAA AATTCTGGTA ATGGTGGGTA AGGGAAAAGA TTATACTAAT
TACACATCGT CAGAAGTTTT TGTAGCAGGT ACGCAGCAAG ATAACGGAGA TTCTTGGTAT
TTAGGTTGTG ATAAAACGCT TCCTTTTTCC CGTACTACAG ATTTAACCAT CCCTGTTCCA
AATGCAAATT TTTACATCAC AGTAACGGGT GAAGTATTTG ATTCAAAAAG TTCAGGTTCA
GTTACACGCA TCTCTCATAA CATTTGTGAT GATTTAGTGA AGACAGACAT GTATGGCTGT
TATGGATCAA CTTATTATTG GGCTAGAGAT TTTAACCTGA AAGATTTTGG CATATCATCT
AATGAAGAAT TCACTATTAC TTCTGGGCAG GTTGGGGTTA ATAATACAGC ATGGGGGGCC
ACTGTTAGTT TTAATATTTA TAAAATTGAC GATAATTTTC CAGCTTCTTT TTCAGAAACG
AATTTAATTG GAAGCAGTCA AATTATAGAT GTTCCTCCAG CTATAGGTTA TAATTCTCAA
ATAATCCAAA TAGATTTTAA CACCCCAATT AAAATACCTG CAGGTGTTGA AAAAATACTA
GTTGAAGTTA AAAAAGGCAG TAATCCTGTG TTAGGCAGTG GATCACAAGT TGCTTTTATA
GCCGGCTCAG CACAAGACAA TGGTGTTTCA TGGTTTAGAG GCTGTAGTCG TTCGCCTGAT
ATTGGATATA ATAAATATTT CTCTACCGTT GATGACGGAA TACAAAATGC TAATTTCTAC
ATAAATGTAA CGGGAAATGT AAAAAATGTT TCGAACCATT TTGAAATGAA TTTTTCAAAT
ATATGCTCAG AATTTTTAAA AGAATTCAGT ATTGATGATC AGTCAAAAGT AGCTTCAGTC
GAATGGAATT TTGGAGATCC TGCTTCTGGG GCGGATAATA TATCTACAGA TTTATCTCCT
TTTCATGATT TTTCGGCAGA TGGAAAATAT ACTGTCACAG CAAAGGTTAC AGGTAAAGAT
GGAACTGTTG AAAATTTATC GGAAACAATA AATGCAAAAG AACCTCCAAA AGCTTATGGG
ATTAATAATA TCTATGCTTG CGAAGATGTA GCTGGAACAG GTATTTCAAA ATCATTCGAT
GTTTCGGCAG TTATGCAGCA AGTTTTAGGA GGACAAACAG ATAAAGATGT TTCTTTTATA
GATGGTAACG GAAAGAAATA TAGTTCTCTG CCAAATCCGT TCACCAATAC GATTAAAGAT
AGAGAAACTA TAACAATAAG AGTAAGTCAT AAAGATAATT TATGTTGTTA TTCTGAAACT
ACATTTGACT TAATTGTAAA TCCATTGCCA AATTTGTCAA CAGTCAGCGA TTTAATCGTT
TGTGATAACG GAAATAGTTT TGCACAGTTT AATTTAAAGT CCGTTGAAAC TACAATTTTA
GGAATCTCGA CAGACTTAAA CGTTGAATTT TATCATCAAA ACGGACAAAA AATATCGGGT
TCTTTAAATG CAGTTACGAA TTTAATCGCA AAAGAAGAAA TTATTAAAGT AAGAGCGATC
AATACCAATA CGAACTGTTA TAACGAATCA ACATTTAAGT TAATAGTAAG TCCGGTGCCT
GTAGCAAATT CTTTGCAGGA GTTAGTAGGT TGCGATGATA ATAATGATGG CATTTCGGAA
TACTTTGATA CTTCAAATAT TGAATCTGCT GTTTTGGGAA ATCAACAAGG AATGAAAGTT
TCTTATGTTG ACAGCAATGG AAATCCATTA ATAAGTCCGT TACCTAATCC ATACACAAAT
ATTATTAAGA ATCAAGACTT TATAAAAGTC AGAGTAACTA ATAATCTAAC CAATTGTTAT
GCAGAAACAG CATTAATTTT AAAAACATCT TCACAACCAA GCATAAATAA ACCGTCAAAC
AAATATGCGT GTGATGAAGG AAATGGTTTT GCAACTTTTG ATTTGTCCAA TTTAACAGCC
GAAATTATAG GAAATCAAAC AGGGCTTAAA GTGATGTATT TTGACGCTAA CGGAAATTCG
TTGCCAAGTC CGCTACCGGC TTTATTTCAA AACACTCACG CAAAATCACA AACAATAAAA
ATAAGAGTAG AGAATGAAAT AAATAGACTT TGCAATTCTG AAACAAGTTT AGACTTATTC
GTAAATGATC TGCCAACAGT AATGATTGAA AAAACTTATT TTTTGTGCAA TTTGGAAGCT
TCTTTGCATG TAAATGTTGC TAATAATTTA GACAGTTATA CCTGGAAGTT CAATGATACA
GATATTGTTT CAAATACATA CGAAGCCGAT TTAATTAATG CAGGAAAATA TACGTTGACA
GTTGGTAAAA TTCAAAATGA TATTTATTGT GAAAACAAAT TTGAGTTCGA ATTAGTAAGA
TCCGTTTTGC CAACAATCAA ACAAATAAGA TATCAGGAAT TATCAGATAA TAATTTTATT
GAAATTATTC CAACAACAGA TGGAAGTCTG GAATATTCTA TAGACGGAAT AAATTATCAG
AATAGCAATT ATTTTTCTAA TATTCAGGGT GGAACTTATG TGGTATATTT AAGAGATAAA
GAAGGATGTG GACAGGATTC AAAAGAAGTT ACCGTAATTG ATTATCCAAA ATTCTTTACT
CCAAATAATG ACGGATATAA TGATTTTTGG CATATAAAAA ACACGAGTAA ATTTCCAAAT
TCTAAAATAT CAATATTTGA TAGATATGGT AAATTAATAA AAGAACTCTT TGCAAATGAT
CATGGATGGG ATGGTTTTTA TAATGGAAGT CAAATGCCAG CAGACGATTA CTGGTTTAAG
GCTAATTTTA ATGAAAACAT TAATTTTTCG GGTCATTTTT CTTTAAAAAG ATAA
|
|---|
| Protein sequence | MKLITNQKSK FNTAISFLFF LFFQQSYAQI TLTNNIGTTL VKTDMYSCKD DESWSRVFKL
SDFGIKPNEQ FIIKSGQVGI AKSDVGANLS FSVYIVDDRF PELFRTYFEK PLLGSRALIP
TKTIHGNPEL MQIDFDEPII VPAGVEKILV MVGKGKDYTN YTSSEVFVAG TQQDNGDSWY
LGCDKTLPFS RTTDLTIPVP NANFYITVTG EVFDSKSSGS VTRISHNICD DLVKTDMYGC
YGSTYYWARD FNLKDFGISS NEEFTITSGQ VGVNNTAWGA TVSFNIYKID DNFPASFSET
NLIGSSQIID VPPAIGYNSQ IIQIDFNTPI KIPAGVEKIL VEVKKGSNPV LGSGSQVAFI
AGSAQDNGVS WFRGCSRSPD IGYNKYFSTV DDGIQNANFY INVTGNVKNV SNHFEMNFSN
ICSEFLKEFS IDDQSKVASV EWNFGDPASG ADNISTDLSP FHDFSADGKY TVTAKVTGKD
GTVENLSETI NAKEPPKAYG INNIYACEDV AGTGISKSFD VSAVMQQVLG GQTDKDVSFI
DGNGKKYSSL PNPFTNTIKD RETITIRVSH KDNLCCYSET TFDLIVNPLP NLSTVSDLIV
CDNGNSFAQF NLKSVETTIL GISTDLNVEF YHQNGQKISG SLNAVTNLIA KEEIIKVRAI
NTNTNCYNES TFKLIVSPVP VANSLQELVG CDDNNDGISE YFDTSNIESA VLGNQQGMKV
SYVDSNGNPL ISPLPNPYTN IIKNQDFIKV RVTNNLTNCY AETALILKTS SQPSINKPSN
KYACDEGNGF ATFDLSNLTA EIIGNQTGLK VMYFDANGNS LPSPLPALFQ NTHAKSQTIK
IRVENEINRL CNSETSLDLF VNDLPTVMIE KTYFLCNLEA SLHVNVANNL DSYTWKFNDT
DIVSNTYEAD LINAGKYTLT VGKIQNDIYC ENKFEFELVR SVLPTIKQIR YQELSDNNFI
EIIPTTDGSL EYSIDGINYQ NSNYFSNIQG GTYVVYLRDK EGCGQDSKEV TVIDYPKFFT
PNNDGYNDFW HIKNTSKFPN SKISIFDRYG KLIKELFAND HGWDGFYNGS QMPADDYWFK
ANFNENINFS GHFSLKR
|
|---|
| |