Gene Fjoh_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1087 
Symbol 
ID5091817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1232081 
End bp1233142 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content34% 
IMG OID644740487 
Product3-oxoacyl-(acyl-carrier-protein) synthase-like protein 
Protein accessionYP_001193439 
Protein GI146298848 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CATATATAAA TGGAGTAGGC TGTATTTCGA CTCAAAAAAC ATTTGATACT 
GTTTTTTTAG AAGAGGCCAA TGTTAATCAC GATGAAAATG TACTGGCAAT TGTTTCGCCG
GCATACAAAG AATATATTTC TCCGGCCGCA AGCCGAAGAA TGGCAAAAGG TGTAAAAAAC
GGAATTGTAG CTTCGGCCTT AGCCATGAAA GATGCAAATG TCGAAAAAGT CGATGCCATT
ATTACCGGAA CCGGTTTAGG CTGTATCGAA GATTCTGAAA AATTCCTGAA AAGTATTTTA
GATAATAAAG AAGAGTTCCT TACTCCTACT TCTTTCATTC AATCGACTCA TAATACAGTT
GGTGCGCAGA TTGCACTTTT ACAGCAATGT AAAGGCTATA ATTTTACGTA TGTAAACGGT
GCGGTTTCTT TTGAATCGGC ACTTTTAGAT GCTAAAATGC AGATCGAAGA AGATGAAGCC
AATTCAATTT TAGTTGGCGG TGTTGATGAA AACGGTGATT ATACTACTGC ACTTTTCAAA
TTAAAGGGAC GAATTAAAGC TGATAATTCG GCTCCTTATG ACGTTTTAAC TTCTAAAACA
AGCGGTGCCG TTTATGGTGA AGGTGCCAGT TTTTTTGTTT TAGAAAACGA AAGAAAAGAC
AATACCTATG CTGAACTTCT AGATGTTGCT ATTGTAAATA CCCTGGAAGC AAATGAAGTT
GAAACTGAAA TCAAATCTTT TCTAAAATCT AATAACTTAG AAATTTCAGA TATTGATGCT
TTGGTTTTAG GTTTTGACGG AAATGCAGAT TTTGAAAATT ATTATAGAAA TCTGGCCGAA
AATGCTTTCT CAAAAACTCC TGTTTTGTAT TACAAACATT TGAGTGGCGA ATATGATACA
GCTTCGGCTT TTGCTTTTTG GATGGCTGCA AAAATTTTAA AAACACAGGA AGTTCCTGAA
ATCATAAAAG TAAATCAGCT TACAAAATCA GCTTACAAAA CCATTTTATT GTACAACCAA
TTAAGCGGAA AAAATCATAG TTTTACGTTA CTGTCAAAAT GA
 
Protein sequence
MKKTYINGVG CISTQKTFDT VFLEEANVNH DENVLAIVSP AYKEYISPAA SRRMAKGVKN 
GIVASALAMK DANVEKVDAI ITGTGLGCIE DSEKFLKSIL DNKEEFLTPT SFIQSTHNTV
GAQIALLQQC KGYNFTYVNG AVSFESALLD AKMQIEEDEA NSILVGGVDE NGDYTTALFK
LKGRIKADNS APYDVLTSKT SGAVYGEGAS FFVLENERKD NTYAELLDVA IVNTLEANEV
ETEIKSFLKS NNLEISDIDA LVLGFDGNAD FENYYRNLAE NAFSKTPVLY YKHLSGEYDT
ASAFAFWMAA KILKTQEVPE IIKVNQLTKS AYKTILLYNQ LSGKNHSFTL LSK