Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1065 |
Symbol | |
ID | 5091795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1208340 |
End bp | 1209689 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644740465 |
Product | TPR repeat-containing protein |
Protein accession | YP_001193417 |
Protein GI | 146298826 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GGGTTTTGAT AATTTTATTT TTTGCTTTGT TAAGCAATGC AGCTTCGGTT TTTGCACAGA CAGAACCAGA AGATATTGCT TTGGCACCAG ATGAATATCA AGATGCATTT TATGAATCTT TGAAACAAAA AGGAATCGAA AATTACGATA AAGCTATAGC ATCTTTAGAA AAATGTATTA AACTAAAACC TTCAGATGCT GTTGCTTATT TTGAAGTTGG AAAAAATTAT CTGGCTTTAA AAGAATATCA AAATGCCCAG ACCGCATTTG AAAAAGCAAC ACAGCTAAAT CCAAAAAATA AATGGTACTG GCTGGGGATT TATGATGTAA GTTACGAAAC CAAAAATTAT CCTCTGGCAA TAGAAACCAT TCAGAAAATT ATTGTTTTTG ATGAAGAATA TAAAGACGAT TTAATATCGC TATATATGAT TACAAATCAA TACGATAAAG CACTTATCGC GATTAATGAA ATGAACGACA AATTCGGAAA ATCATCAGAT CGCGAAGTAT ACAAAAGCCA GATTTTATCG CAGGGTAAAT ATCAAAATGC CGAGATTTCA AATTTAATTG AACAAATTAA AAAAAATCCA AAAGAAGAAT CCAATTATGT AAACCTGATT TTTTTGTATT CAAAATCAGA TGAAACAGAC AAAGCTGTCG ATGTAGCAAA ACAATTGGCA AAAGAACTTC CAAATTCAGA ATGGGGGCAG GTAAGTTTAT TTAAAACGTA TTTAGATTCG AATCAGGCAG ACAAAGCAAT TAAGTCGATG AATACAATTT TGTCAAGTTC AAAAATTGAT TCAAAAATAA AACATCGAAC TTTAAACGAG TTTTTGATTT ATGTAAATAA AAATCCGCAG TATGCACCGG ATTTAGAAAA AGCCATTTCC TATTTTGATA ACGATAAGGA TGTTGACGTT GCCAAAGAAA TTGGAAAATT TTATCATAGT AAAAACCAAT TTGAAAACGC CATTAAATAT TATGAAAAAG ATTTAATGAC CAATTCAGAC ACAGATCGTG AAACCAATTT GCTTTTGCTT GAAGCATATA GTAAAGCAAA ACAATTTGCG CCCATGACAA AAAGAGCCAT GACTATGATT GAAGTTTATC CGAGCCAGCC TCAGTTTTAT TACTATGCAG GTTTAGGAAG CAATCAGTTA CAGCAGTTTA AAAATGCAAA AACCGTTTTA GAAATGGGAC TTGATTATGT GGTTGATGAT AAAAAATTAG AAGCAGATTT TAATATTCAA TTGGGAGAAG CATATAATGG ATTAGGAGAT GCTAAGAAAA AAGAGGAATA CTTTTTGAAG GCAAACGAAT TATTAAAACA AAAGAAGTAA
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Protein sequence | MKKRVLIILF FALLSNAASV FAQTEPEDIA LAPDEYQDAF YESLKQKGIE NYDKAIASLE KCIKLKPSDA VAYFEVGKNY LALKEYQNAQ TAFEKATQLN PKNKWYWLGI YDVSYETKNY PLAIETIQKI IVFDEEYKDD LISLYMITNQ YDKALIAINE MNDKFGKSSD REVYKSQILS QGKYQNAEIS NLIEQIKKNP KEESNYVNLI FLYSKSDETD KAVDVAKQLA KELPNSEWGQ VSLFKTYLDS NQADKAIKSM NTILSSSKID SKIKHRTLNE FLIYVNKNPQ YAPDLEKAIS YFDNDKDVDV AKEIGKFYHS KNQFENAIKY YEKDLMTNSD TDRETNLLLL EAYSKAKQFA PMTKRAMTMI EVYPSQPQFY YYAGLGSNQL QQFKNAKTVL EMGLDYVVDD KKLEADFNIQ LGEAYNGLGD AKKKEEYFLK ANELLKQKK
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