Gene Fjoh_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1065 
Symbol 
ID5091795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1208340 
End bp1209689 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content31% 
IMG OID644740465 
ProductTPR repeat-containing protein 
Protein accessionYP_001193417 
Protein GI146298826 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GGGTTTTGAT AATTTTATTT TTTGCTTTGT TAAGCAATGC AGCTTCGGTT 
TTTGCACAGA CAGAACCAGA AGATATTGCT TTGGCACCAG ATGAATATCA AGATGCATTT
TATGAATCTT TGAAACAAAA AGGAATCGAA AATTACGATA AAGCTATAGC ATCTTTAGAA
AAATGTATTA AACTAAAACC TTCAGATGCT GTTGCTTATT TTGAAGTTGG AAAAAATTAT
CTGGCTTTAA AAGAATATCA AAATGCCCAG ACCGCATTTG AAAAAGCAAC ACAGCTAAAT
CCAAAAAATA AATGGTACTG GCTGGGGATT TATGATGTAA GTTACGAAAC CAAAAATTAT
CCTCTGGCAA TAGAAACCAT TCAGAAAATT ATTGTTTTTG ATGAAGAATA TAAAGACGAT
TTAATATCGC TATATATGAT TACAAATCAA TACGATAAAG CACTTATCGC GATTAATGAA
ATGAACGACA AATTCGGAAA ATCATCAGAT CGCGAAGTAT ACAAAAGCCA GATTTTATCG
CAGGGTAAAT ATCAAAATGC CGAGATTTCA AATTTAATTG AACAAATTAA AAAAAATCCA
AAAGAAGAAT CCAATTATGT AAACCTGATT TTTTTGTATT CAAAATCAGA TGAAACAGAC
AAAGCTGTCG ATGTAGCAAA ACAATTGGCA AAAGAACTTC CAAATTCAGA ATGGGGGCAG
GTAAGTTTAT TTAAAACGTA TTTAGATTCG AATCAGGCAG ACAAAGCAAT TAAGTCGATG
AATACAATTT TGTCAAGTTC AAAAATTGAT TCAAAAATAA AACATCGAAC TTTAAACGAG
TTTTTGATTT ATGTAAATAA AAATCCGCAG TATGCACCGG ATTTAGAAAA AGCCATTTCC
TATTTTGATA ACGATAAGGA TGTTGACGTT GCCAAAGAAA TTGGAAAATT TTATCATAGT
AAAAACCAAT TTGAAAACGC CATTAAATAT TATGAAAAAG ATTTAATGAC CAATTCAGAC
ACAGATCGTG AAACCAATTT GCTTTTGCTT GAAGCATATA GTAAAGCAAA ACAATTTGCG
CCCATGACAA AAAGAGCCAT GACTATGATT GAAGTTTATC CGAGCCAGCC TCAGTTTTAT
TACTATGCAG GTTTAGGAAG CAATCAGTTA CAGCAGTTTA AAAATGCAAA AACCGTTTTA
GAAATGGGAC TTGATTATGT GGTTGATGAT AAAAAATTAG AAGCAGATTT TAATATTCAA
TTGGGAGAAG CATATAATGG ATTAGGAGAT GCTAAGAAAA AAGAGGAATA CTTTTTGAAG
GCAAACGAAT TATTAAAACA AAAGAAGTAA
 
Protein sequence
MKKRVLIILF FALLSNAASV FAQTEPEDIA LAPDEYQDAF YESLKQKGIE NYDKAIASLE 
KCIKLKPSDA VAYFEVGKNY LALKEYQNAQ TAFEKATQLN PKNKWYWLGI YDVSYETKNY
PLAIETIQKI IVFDEEYKDD LISLYMITNQ YDKALIAINE MNDKFGKSSD REVYKSQILS
QGKYQNAEIS NLIEQIKKNP KEESNYVNLI FLYSKSDETD KAVDVAKQLA KELPNSEWGQ
VSLFKTYLDS NQADKAIKSM NTILSSSKID SKIKHRTLNE FLIYVNKNPQ YAPDLEKAIS
YFDNDKDVDV AKEIGKFYHS KNQFENAIKY YEKDLMTNSD TDRETNLLLL EAYSKAKQFA
PMTKRAMTMI EVYPSQPQFY YYAGLGSNQL QQFKNAKTVL EMGLDYVVDD KKLEADFNIQ
LGEAYNGLGD AKKKEEYFLK ANELLKQKK