| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1044 |
|---|
| Symbol | upp |
|---|
| ID | 5091774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1188431 |
|---|
| End bp | 1189084 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740444 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001193396 |
|---|
| Protein GI | 146298805 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.313495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC ATTATATATC TGAAAACAAT AGTGTTCTAA ATCATTTTCT GGGACAAATT
AGAAATGTAA ATGTGCAGAA CGACAGCATG CGTTTTAGAA GAAATATTGA ACGCATTGGC
GAAATTATGG CTTATGAATT AAGCAAAATT TTACCTTACA AAGAGGTTGA AATTCAAACG
CCGCTTGGCA TTAAAAAAAC TACTGAAATA GATACTGATT TGGTTTTATG TCCAATTTTA
AGAGCCGGAT TGCCGCTTCA TAACGGATTT TTAAATTATT TCGATCATGC CGAAAACAGT
TTTGTTTCTG CCTGCAGATA TCATCCAAAT GGTGATGATG AATTCGAAAT TTTAGTTGAA
TATCAGGCTA TTTCAAATTT AAATAACAAA ACCGTTTTGC TTCTGGATCC AATGCTGGCA
ACAGGACAAT CTATAGTGGC GGTTCACAAA AAATTAATTG AAAACGCTGC ACCTGCAGAA
TTTCACATTG TTGTAGTTAT TGCTGCTCCA GAAGGAATAG CACATCTTGA GGAAAATCTT
CCTGAAAATT GTCATTTGTG GGTGGCATCA TTAGACGAAA AACTTAACGA GAAAAACTAC
ATTGTTCCTG GTCTTGGCGA TGCCGGCGAT CTTGCTTACG GAAGTAAATT ATAA
|
|---|
| Protein sequence | MKIHYISENN SVLNHFLGQI RNVNVQNDSM RFRRNIERIG EIMAYELSKI LPYKEVEIQT
PLGIKKTTEI DTDLVLCPIL RAGLPLHNGF LNYFDHAENS FVSACRYHPN GDDEFEILVE
YQAISNLNNK TVLLLDPMLA TGQSIVAVHK KLIENAAPAE FHIVVVIAAP EGIAHLEENL
PENCHLWVAS LDEKLNEKNY IVPGLGDAGD LAYGSKL
|
|---|
| |