Gene Fjoh_1000 details

Gene Information

• Locus tag: Fjoh_1000
• ID: 5090591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 1140015
• End bp: 1140593
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644740399
• Product: outer membrane chaperone Skp (OmpH)
• Protein accession: YP_001193352
• Protein GI: 146298761

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CATTAGCAAT TATCGCACTT TCAATTTTAG TTGTTTCGTG TAATAAAGCA 
ACAGAAGTTA AGGAAGTAAA AACAGCTTAC ATAGATACTT CAGTTTTAAT GAAAGAGTAC 
ACTGAAGCAA AAGACCTTGA GGCTAAATAC AAAGCTCAGG CAGAAGAAAA AGGAAGACAA 
TTACAAGCTG AAATTTCCCG CTTCAAACAA GACGCTGCTA ATTTTCAAAG CCAGGCACAG 
GCAAATGGCC AGCAATGGGC TCAGCAAAGA GGTGCAGAAT TGCAAAAAAG AGAGCAGCAA 
TTAGGATATG CTCAACAAGC ATTATCTCAG CAATTACAGC AGGAAAGCGG TGTTGAAATG 
GATTCTCTTG TAAGCGGAGT TAAAAAATTC ATCAAAGAAT ACGGTAAGAA AAACGGATAT 
TCTTATATCT ACGGTACAGG TGATGCAGCT ACAGTTTTGT ATGCTGAAGA CAAGTATGAT 
ATTACAAAAG AAGTAGTTAA AGCTTTAAAT GACAAATACA AAGCGTCTCC AAAAGCAGAA 
GAAAAAGCTC CTGCTAAAAA AGAAGAAGCT AAAAAATAA 

 

Protein sequence

MKKALAIIAL SILVVSCNKA TEVKEVKTAY IDTSVLMKEY TEAKDLEAKY KAQAEEKGRQ 
LQAEISRFKQ DAANFQSQAQ ANGQQWAQQR GAELQKREQQ LGYAQQALSQ QLQQESGVEM 
DSLVSGVKKF IKEYGKKNGY SYIYGTGDAA TVLYAEDKYD ITKEVVKALN DKYKASPKAE 
EKAPAKKEEA KK