Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0846 |
Symbol | |
ID | 5092035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 956624 |
End bp | 958405 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644740246 |
Product | TPR repeat-containing protein |
Protein accession | YP_001193199 |
Protein GI | 146298608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC TCTTTATCTA TATCTTTTTG TTGTGGTCTG GTCTTATGTT CTCACAAAAC GAACAGTTAG CGAACAATTA CTACGATAAA GGCGATTTTG AAAAAGCTAA GATGATCTAC GAAGATCTTT TAAGAGGCTC GCCATCCAAT ACCCAATATT TTTTAAGAAC GATAGATTGT TATCAGCAGT TACAGCAGTT TGATATAGCA GAGAAAACAA TTCTGGAACG ATACAACCGC TACAAACAAG GCGTTTTCTT GGTTGAATTG GGATACAATT ATCAATTACA GAAGAACGAA TCGAAAGCCA AAAGTTACTA CGAACAGGCA ATTGAAAAAA TCAAAACCAA TCCCAATGAT GTTTACGGAG TTGGAAATGC ATTTGAGAAA AAGGTTTTAT TAGAATATGC TCTAAAATCC TATCAAACCG CAATGCAGGT GCAGCCGAAT TATAATTTCA ATTTTCAAAT TGGAATGTTA TACGGCCAGT TAGGTAAAAC CGATTTGATG ATTGATCTCT TGCTGACAGA ATCGTATAAC AATCAGCAGA ATGCTAATTT GATCCAAATG CAGCTTTCTC GTTTTATGAA TGGCGAAACC GATAATACGG CTTTTAAAGA TGCGATGCGA AAAGCATTGA TTTTAAGAAC CCAGAAAGAT CAGGATGTTT TTTGGAATCA TTACTTAAGC TGGTTTTATG TGCAGCAGAA AGAATTTGGA AAAGCATTTA TTCAGGAAAA AGCGATTTAC AAACGCGAAC CGGAATCTTT AATCAGCATT GTAAATTTGA GTCAGTTTGC ATTGAATGAA GATGATACCG AAACAGCTTC TGAAATCCTG AATTTTATTC TTCAAAATAC AAAAGATGTC GATTTGCTTA TTAAAAGCAA CGCAAGTTTA ATACAGATTA AAATTGATAA AGCCCAGGAA AAAGAGTATC CGGCCATTAC AAACGAACTG CAGCAATTAT TGGTTACTTA CGAAGTAACT CCTTTTACCT TATCTTTGCA ATTAATTCAG GCTCATTTTT TGGCTTTTAA TTTAAAAAAG ACAGAAGAAG CCAAAACAGT TGTAAAGAAA GCTCTAACTT TAAATTTAAA TGCTTATCAG CAGGCTGATG CCAAAATGGA GCTTGCAGAT ATTCTGCTTT TAGAAGAAAA GTACAATCAG GCGTTAATTT ATTATTCGCA GATCCAGTTA GATTTAAAGA ATGATGTCAT GTCACACGAA GCTAGTTTAA AGGCTGCGAA AACCAGTTAT TACAAAGGCG ATTTTGAATG GGCATTAAAA CAATTTAAAG AATTAAAATC GGCAAACACG CAATTAATTG CCAACGACGC TCTTGAATAT TTCTTACTGA TAAATGATAA TACAGCTGCC GATTCGACAC AAACAGCCTT AAAGGAGTTT GCAAAAGGCG ATTTTTTACT TTATCAGAAC AAAAAACCAG AGGCTATTAC ACAGTTTCAG AATATTTTAA AGAACTTTAA AGGTCAGGAA ATAGAAGCTG TAACATTGTT GCGTTTAGGT AAAATATACG AAAGCCAAAA GGATTTTGCT TCGGCTTTAA GCCAATACCA GCAAATAATA GACAATCACA GCGACGGAAT TTATGTAGAC GAAGCGCTGT TTTTCTCAGC AGAAATTTAC AACGACGAAT TAAAAGACGT AGAAAAGGCC AAGCCTTTAT ATGAAAAGGT AATTTTTAAC CATCAGGATA GTATTTACTT TGTTGATGCC AGAAAAAAAT ACCGGGAATT GAGAGGAGAT AAGAATTTAT AG
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Protein sequence | MKNLFIYIFL LWSGLMFSQN EQLANNYYDK GDFEKAKMIY EDLLRGSPSN TQYFLRTIDC YQQLQQFDIA EKTILERYNR YKQGVFLVEL GYNYQLQKNE SKAKSYYEQA IEKIKTNPND VYGVGNAFEK KVLLEYALKS YQTAMQVQPN YNFNFQIGML YGQLGKTDLM IDLLLTESYN NQQNANLIQM QLSRFMNGET DNTAFKDAMR KALILRTQKD QDVFWNHYLS WFYVQQKEFG KAFIQEKAIY KREPESLISI VNLSQFALNE DDTETASEIL NFILQNTKDV DLLIKSNASL IQIKIDKAQE KEYPAITNEL QQLLVTYEVT PFTLSLQLIQ AHFLAFNLKK TEEAKTVVKK ALTLNLNAYQ QADAKMELAD ILLLEEKYNQ ALIYYSQIQL DLKNDVMSHE ASLKAAKTSY YKGDFEWALK QFKELKSANT QLIANDALEY FLLINDNTAA DSTQTALKEF AKGDFLLYQN KKPEAITQFQ NILKNFKGQE IEAVTLLRLG KIYESQKDFA SALSQYQQII DNHSDGIYVD EALFFSAEIY NDELKDVEKA KPLYEKVIFN HQDSIYFVDA RKKYRELRGD KNL
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