Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0758 |
Symbol | |
ID | 5093697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 831763 |
End bp | 832668 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644740159 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001193112 |
Protein GI | 146298521 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.733983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAATC TAGAATGGTA CAGAACTTTT AAAGCTGTAT ATAAAAATGG TAATTTTTCG GTAGCCGCAA AAGAGTTATT TATGAGCCAG CCTGCGGTTA GTCAGCAAAT TTCTATGCTT GAGGCTCACG TTGGGAATAA ATTATTTAAT CGGAAATCAA AAGGAGTAGA GCCAACCGAA TACGCTAAGT TACTGAATAA TTTGATAATA GATGCGCTCG ATCGTCTTGA AAGTGTCGAA ACCGGTTTTC GGGCAAAAGC AGAAGATGCT AACCGATTAA TTTCTGTCGG GATTTCAAAA CATCTTTTTG ACTGCGTTGG AAATCTCTTA ATTTCAAAGT TTGATTTAAT AGATTTTACT TTTGCAGAAA ACGACGAGCT TTTTGCATTA GTAGATTCAA AAAAACTCGA TTTTGCCATT ACAACCAAAA GGTTCGATAC TTTTGATACT ACTTATGAAA TAGTTGGAAA AATTAAACTC ATAATGGTTG CTCCGGCAAG TTTGGATATA ACCGATTTCC GCCAGAAATT GAAAGCAGAT AATTTTACTG AAATAGAGCA ATGGCTTAAC GGACAAAAAT GGTACAGTCA TGACGCGAGA ATTCCGCACA TAAAAGTATT CTGGCTTCAT GCTTTCAATA AAAAAAGGCC GTCGATGGTG CCAAATTACA TTATTCCTTC AGAATCTGAG ATGCTGAGAC TGCTTTCAAA AAATGATGGT GTTGCGGTGA CCTGGAATTG TAATGCAAGA AATTATATCA AAGAAAATAA ACTGCAATTA GTATGGAACA GTTTTCATGT TCCCGAAGAA TTTGTCTATT TACTGGCTCC TAAAAATAAT AATGTGAAAT CGTTTTTTGA TATAATTGAA AAAGAATTAA AACTGTTTTT TGGAAATAGA TTATAA
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Protein sequence | MVNLEWYRTF KAVYKNGNFS VAAKELFMSQ PAVSQQISML EAHVGNKLFN RKSKGVEPTE YAKLLNNLII DALDRLESVE TGFRAKAEDA NRLISVGISK HLFDCVGNLL ISKFDLIDFT FAENDELFAL VDSKKLDFAI TTKRFDTFDT TYEIVGKIKL IMVAPASLDI TDFRQKLKAD NFTEIEQWLN GQKWYSHDAR IPHIKVFWLH AFNKKRPSMV PNYIIPSESE MLRLLSKNDG VAVTWNCNAR NYIKENKLQL VWNSFHVPEE FVYLLAPKNN NVKSFFDIIE KELKLFFGNR L
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