| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0676 |
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| Symbol | sdhA |
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| ID | 5091421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 740864 |
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| End bp | 742864 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644740077 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001193030 |
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| Protein GI | 146298439 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.762108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAG ATTCAAAAAT TCCAAATGGT CCTATAGCGG ACAAATGGAC AAATTATAAA
GATCATATTA ATTTAGTAAA CCCTGCTAAC AAACGTAATT TAGATATTAT TGTAGTTGGT
ACAGGTTTAG CTGGAGGTTC GGCTGCGGCT ACTTTGGCTG AGTTAGGATA TAACGTAAAA
GCATTCTGCT TCCAAGATTC TCCACGTCGT GCGCACTCTA TTGCTGCACA AGGAGGTATC
AATGCTGCAA AAAATTATAA AGGTGATGGT GACTCAGTTT ACAGATTGTT CTACGATACT
GTAAAAGGTG GTGACTACCG TGCACGTGAG GCAAACGTTC ACCGTTTGGC TGAGGTTTCT
GCAAACATTA TTGACCAGTG TGTGGCTCAA GGGGTGCCAT TGGCTCGTGA ATACGGCGGA
CTTTTAGATA ACCGTTCTTT TGGAGGAACT TTGGTTTCTC GTACATTTTA TGCACAAGGA
CAAACTGGAC AGCAATTATT GTTAGGAGCT TATTCTGCAA TGAACCGTCA GATTGGTCGT
GGAAAAATTA AAATGTACAA CCGTCACGAA ATGCTTGACA TTGTAATCGT GAACGGAAAA
GCGAGAGGTA TTATCGCTCG TGATTTAATT ACAGGAAAAA TAGAAAGACA TTCTGCTCAC
GCGGTAGTAA TTGGTTCTGG AGGATACGGA AACGTATTTT TCCTTTCAAC AAATGCTATG
GGAAGTAACG CAACAGCAGC TTGGAAAATT CATAAAAAAG GAGCGTTTTT CGCAAATCCT
TGTTACACAC AAATTCACCC AACATGTATT CCGGTTTCAG GAGATCACCA GTCAAAACTG
ACTTTGATGT CTGAATCTTT ACGTAATGAC GGTCGTATTT GGGTTCCAAA AAACTTGGAA
GATGCAAAAG CTATCCGTGA AGGGAAGAAA AAAGCAATTG ATTTATCTGA AGAAGAAAGA
GATTATTTCT TAGAAAGAAG ATATCCTGCG TTTGGTAACT TAGTTCCTCG TGACGTTGCG
TCTCGTGCGG CTAAAGAAAG ATGTGATGCT GGTTTTGGTG TTAACAAAAC GGGTGAAGCA
GTTTATTTAG ATTTTGCGGC GGCTATCGAA CGTTACGGAA AAGAAGCTGC TCACGTAAAA
GGTTTGAATG AAAATGACAA AGCTTTAATT ACTAAATTAG GAACTGATAT TGTAAAAAGT
AAATACGGAA ACTTATTCCA AATGTACTTG AAAATTGTTG ACGAAGATCC TTATGTAACA
CCAATGATGA TTTACCCGGC GGTTCACTAC ACAATGGGTG GAACTTGGGT TGATTATAAC
TTGATGACTA CAATTCCTGG ATGTTTCTCA ATTGGAGAAT CTAACTTCTC TGATCACGGA
GCAAACAGAC TTGGAGCTTC TGCTTTAATG CAAGGTTTAG CTGATGGATA TTTCGTATTG
CCATATACTA TTGGAGATTA TTTAGCTCCG GATATTAAAA TGGGACCAAT TTCTACAGAT
TTACCAGAAT TCGTTGAAGC TGAAAAAGCG GTTGTAGATC AAATCAATAA ATTCATCAAT
AACAACGGTA AACATTCTGT AGATTATTTC CACAAAAAAC TTGGAAAAAT CATGTGGGAT
AAAGTAGGTA TGGCTCGTAA CGCTAAAGGA TTAACTGAAG CTATCGAAGA AATTGCTGCT
TTACGTGAAG AGTTTTATAA AGATGTAAAA GTTCCTGGAA GCCCTTACGA ATTTAATCAG
GAATTAGAAA AAGCAACTCG TGTTGCCGAT TTCTTAGAAT TAGGAGAATT GTTCGCTAAA
GATGCTTTAC ACCGTAACGA ATCTTGTGGA GGTCACTTCC GTGAGGAATA CCAGACAGAA
GAAGGAGAAG CACTTCGTGA CGATGATAAC TTTGCATACG TTGCAGCTTG GGAATACAAA
GGAAAACCAA GTGATGCCGT ATTACACAAA GAACCACTTA ATTACGAAAA CATTAAATTA
GTACAGCGTA GCTATAAATA A
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| Protein sequence | MALDSKIPNG PIADKWTNYK DHINLVNPAN KRNLDIIVVG TGLAGGSAAA TLAELGYNVK
AFCFQDSPRR AHSIAAQGGI NAAKNYKGDG DSVYRLFYDT VKGGDYRARE ANVHRLAEVS
ANIIDQCVAQ GVPLAREYGG LLDNRSFGGT LVSRTFYAQG QTGQQLLLGA YSAMNRQIGR
GKIKMYNRHE MLDIVIVNGK ARGIIARDLI TGKIERHSAH AVVIGSGGYG NVFFLSTNAM
GSNATAAWKI HKKGAFFANP CYTQIHPTCI PVSGDHQSKL TLMSESLRND GRIWVPKNLE
DAKAIREGKK KAIDLSEEER DYFLERRYPA FGNLVPRDVA SRAAKERCDA GFGVNKTGEA
VYLDFAAAIE RYGKEAAHVK GLNENDKALI TKLGTDIVKS KYGNLFQMYL KIVDEDPYVT
PMMIYPAVHY TMGGTWVDYN LMTTIPGCFS IGESNFSDHG ANRLGASALM QGLADGYFVL
PYTIGDYLAP DIKMGPISTD LPEFVEAEKA VVDQINKFIN NNGKHSVDYF HKKLGKIMWD
KVGMARNAKG LTEAIEEIAA LREEFYKDVK VPGSPYEFNQ ELEKATRVAD FLELGELFAK
DALHRNESCG GHFREEYQTE EGEALRDDDN FAYVAAWEYK GKPSDAVLHK EPLNYENIKL
VQRSYK
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