| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0618 |
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| Symbol | |
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| ID | 5090924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 679808 |
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| End bp | 681712 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644740018 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001192972 |
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| Protein GI | 146298381 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00736959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AATTAGGTTA CGTATTTATC ATACTGTTTT TTACAAATAG TATTATTGCT
CAGCAAGACA TAAATCAATT AAGCAAACAA TTTGATGCTC TTTCTGTACA GAAAAAAGGT
CTTAATGAAA CTATTAAAAT TGATGTATCC GGATTAACAT TACGAGATTT CATTTCTTCT
ATTGCCGAAG AACACCAGCT GAATATTGAT GTCGATTCAG AATTAACCCA GCAGGTATCC
AACAACTTTT TTGATGTAAC AGTAAAAGAT GTATTGATTC ATTTGGTTCA AAAATATGAT
CTGGAAGTAA CTTTCATGAA CAACATCATT GTTTTCAAAA AAAGAAAAGC AGTAACTGTT
GTAGAGAAAA AAGCACCAAA AGTAATTGAT GTCAGTTACA ATCCTCAAAA TGATTTTTTG
TCTGTAAAAC TAGAAAACGA TACACTTTCG GCTGTTGCAA AAGCTATCAT CGATAAATCG
GGTAAAAACT TAATTGTGGC GGCCGATGCA AAAAATCTTC GAGTTTCCTC TTATATTCTA
AATCGTCCGT TTGATCAGGT TATAGAAATG ATGTCAAAAT CAAATGATCT GACAGCAACA
AAAGATGATA ATGGCTTTTT CTATATTGAA AAAAATAAAG ATGCGACAGT AACTGTAAAT
GGAAGCACGC AAAAAGTGAA ACCGCCAAAA GCAAGTTCTG GACTTCCTGG ATATTATGAA
GTTAATTTAA ATAAAAATGG CTTTCTGTCT GTAAAAGCAT ATATAGCAGA CGCCTCAGAT
GTATTAACAG AAGCTGCCGA AAAACTGCAC GTAAACTATT TTTTATACAA CAAACCCGAG
AATGAAAAAA CTACTCTGTC TGCTGATAAT ATAACCTTCG ATGAGTTGTT GTTTCACATT
TTTAAAGGAA AAAAATATAC ATACAAAAAA CAGGATAATT TATATTTAAT TGGTGAAGAA
GGTTCTGAGG GATTAAGAGC TACAGAGGTA ATTCAGCTTG AAAACAGATC TATTGAATTG
GTTCTTCCAT CGCTTCCAAA AGTGTTTTCT GAAAAACTTG AAATTAAAGA GTTTGTCGAA
CTAAACGGAC TTGTAGCTTC TGGTTCAAAA TCTATTCTTG AGGAATTAAA ACTTTATATA
AAGCAAATTG ATAAGATTGT ACCAATGGTG CAGATTGAAG TCATAATCGC TCAATATAAC
AAATCTCACG ATGTACAAAC CGGAATGAAA GCAGGACTTG ACAAAATCAA CAAACAAGTT
ACAGGCGGCA CTGTGTTTCC TACCACAGAT ATGACTGTAA ATTCAACTTC TGTAAATAGT
TTAATTGATG CATTCAATGG ATTCGGAATT TTTAAACTAG GAAAAGTTAC AGAGGCTTTC
TACCTAAACT TAAAATTACT CGAAAACAAT TCAATTGTAA AAGTAGAATC AACTCCTAAG
ATTGCAACAA TAAGCGGACA TGAAGCTAAA TTATCTATTG GAGAAACAAG TTACTATTTT
GAACAAAGCA ACCGTTTAAT TAACAGTAAT ATTGGTAACG ATATCTTGAA TTCGGGAACA
TGGAAATCTA CTGATGCTAA TTTAAGTCTC TCTATAAAGC CTTATGTTTC TATTGATGAA
AATGTGACTT TGACAATTGT TGTCGAAAAA AGTTCATTCT TGGGAAGAGC CGGCGAGACC
GCTCCTCCTG GAAAAGCAAC ACAAAAATTT GAATCATTGG TACGTGTAAA AAATGGAGAA
ATGATTTTGC TAGGCGGTTT AGACGAATTA AAGAAAGAAG ATTCTGGCTC AGGAACTCCC
CTATTATCAA GAATTCCAAT TATCAAATGG TTTTTTAGCA GCCGTAAAAA AGGGAAAAAC
AATTCAAAAC TGCATATTTT TATTAAACCA ACAGTGGTAT ATTAA
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| Protein sequence | MFKKLGYVFI ILFFTNSIIA QQDINQLSKQ FDALSVQKKG LNETIKIDVS GLTLRDFISS
IAEEHQLNID VDSELTQQVS NNFFDVTVKD VLIHLVQKYD LEVTFMNNII VFKKRKAVTV
VEKKAPKVID VSYNPQNDFL SVKLENDTLS AVAKAIIDKS GKNLIVAADA KNLRVSSYIL
NRPFDQVIEM MSKSNDLTAT KDDNGFFYIE KNKDATVTVN GSTQKVKPPK ASSGLPGYYE
VNLNKNGFLS VKAYIADASD VLTEAAEKLH VNYFLYNKPE NEKTTLSADN ITFDELLFHI
FKGKKYTYKK QDNLYLIGEE GSEGLRATEV IQLENRSIEL VLPSLPKVFS EKLEIKEFVE
LNGLVASGSK SILEELKLYI KQIDKIVPMV QIEVIIAQYN KSHDVQTGMK AGLDKINKQV
TGGTVFPTTD MTVNSTSVNS LIDAFNGFGI FKLGKVTEAF YLNLKLLENN SIVKVESTPK
IATISGHEAK LSIGETSYYF EQSNRLINSN IGNDILNSGT WKSTDANLSL SIKPYVSIDE
NVTLTIVVEK SSFLGRAGET APPGKATQKF ESLVRVKNGE MILLGGLDEL KKEDSGSGTP
LLSRIPIIKW FFSSRKKGKN NSKLHIFIKP TVVY
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