| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0584 |
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| Symbol | |
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| ID | 5090890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 622967 |
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| End bp | 624427 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644739983 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001192938 |
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| Protein GI | 146298347 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGC AATTTTTAAA TTTAAAATTA TCCCAAAAAT TATCTCCACA GCAAATTCAG
CTGATGAAGT TAATTCAATT GCCTACGCAA GCTTTTGAAC AGCGTTTATT AGAAGAAATG
AACGAAAATC CAGCTTTGGA AGCTGGTAAA GAAGACGATT ATGAAGCTGA CGAATACGCA
AATGAAGACT ACGACGATTA TGATGATGCA GAATCAGACA GAATCGAAGC AGACGACATT
AACATTGACG AATATCTAAG CGACGACGAT ACTCCTGATT ACAAAACTCA GGTAAACAAT
TACAGCGACG ACGAAGAGCG CGAAACACCT TTTGCGGCTC CTATCAGTTT TCATCAGGAT
TTAATCAATC AGCTGAATAC TTTTATTTTA AACGATGAAG AACGCGAAAT TGCGGAATTC
CTTGTTGGAA GTATTGATGA CATGGGTTAT ATCCGCAGAA GTATTCCGGA TATCGTAGAC
GACATGGCTT TTACTCAGGG AATTTATACT GATGAAGCAA TGGTCGAGAA AATGATGACG
GTAATTCACG AACTAGAACC CTCGGGTGTC GGTGCGCGTG ATTTACAAGA ATGTTTACTT
CTTCAGTTAA AACATAAAAC TCCAACTGAA TATGTTGATT TAGCAATTGA TATTATCGAA
AATCAGTTTG ATGCTTTTAC AAAGAAACAC TACGATAAAC TTTTACAGAA ATACAGTGTT
TCTAATGAAC AGCTTAAAAA AGCCATTCAC GAAATTGAAA GACTGAACCC GAAACCGGGA
GGATCTTTTG CCGGAAATAA TAAAGTTACA GAAAATGTAG TTCCGGATTT TGCCATTAGA
ATTGTTGACG GTGAGTTGGA ATTGACTTTA AATGGAAGAA ATGCTCCTTC CCTGCACGTT
TCTAAAGATT ATCAGGAGAT GATGCAGACG TATAAAGAAT CGAAAGATAA ATCGACTGCA
CAGAAAGATG CTGTTCAGTT TATCAAACAA AAATTAGATT CTGCAAAATG GTTTATCGAC
GCGATCAGAC AGCGTCAGGA AACTCTTTTT GTAACCATGA ATGCAATTAT GCATTATCAG
GAAGAATATT TCTTAGACGG CGACGAAACC AAACTAAAAC CAATGATCTT AAAAGACATT
GCGGATATGG TTGGTTTGGA TATTTCTACG ATTTCGCGTG TTGCCAACAG TAAATATGTA
GAAACACCAT ACGGAACCAA ACTTATTAAA GAGTTTTTCT CTGAAGCTAT GAAAAACGAT
CAGGGTGAAG ACGTTTCTAC TCTTGAAATA AAAAAGATTC TTCAAAACAC AATTGAGGAA
GAAGATAAGA GAAAACCGCT TCCAGATGAT CAATTAGCCG AAATCTTAAA AGAAAAAGGG
TATCCAATTG CGAGAAGAAC AATCGCTAAA TACCGAGAAC AATTAGATAT TCCGGTTGCG
AGAATGAGAA AGAAAATTTA A
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| Protein sequence | MLKQFLNLKL SQKLSPQQIQ LMKLIQLPTQ AFEQRLLEEM NENPALEAGK EDDYEADEYA
NEDYDDYDDA ESDRIEADDI NIDEYLSDDD TPDYKTQVNN YSDDEERETP FAAPISFHQD
LINQLNTFIL NDEEREIAEF LVGSIDDMGY IRRSIPDIVD DMAFTQGIYT DEAMVEKMMT
VIHELEPSGV GARDLQECLL LQLKHKTPTE YVDLAIDIIE NQFDAFTKKH YDKLLQKYSV
SNEQLKKAIH EIERLNPKPG GSFAGNNKVT ENVVPDFAIR IVDGELELTL NGRNAPSLHV
SKDYQEMMQT YKESKDKSTA QKDAVQFIKQ KLDSAKWFID AIRQRQETLF VTMNAIMHYQ
EEYFLDGDET KLKPMILKDI ADMVGLDIST ISRVANSKYV ETPYGTKLIK EFFSEAMKND
QGEDVSTLEI KKILQNTIEE EDKRKPLPDD QLAEILKEKG YPIARRTIAK YREQLDIPVA
RMRKKI
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