| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0570 |
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| Symbol | |
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| ID | 5089516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 606473 |
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| End bp | 607162 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644739969 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001192924 |
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| Protein GI | 146298333 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACCTG AAGAATATTT AGAAGGACAA GTTTTACTGA TAGACAAACC TTTAAAATGG
AGTTCGTTTC AGGCAGTTAA CAAATTAAAA TACCTTTTAA TTAATAAAGT AGGACTTCCA
AAAAAGTTCA AAATTGGTCA CGCCGGAACT TTAGATCCTT TAGCAACAGG ATTATTATTA
ATCTGCACCG GAAAATTCAC AAAAAAAATT TCTGAACTTC AAGGACAGGC AAAAGAATAC
ACGGGAACAT TTTATATTGG AGCCACTACT CCATCGTATG ATTTAGAAAC CGAAATCGAT
CAGACTTTCC CAACAGAACA TATTAACGAA GTTCTAATTC ACGAAACGGT AAAACAGTTT
TTAGGCGAAA TCGATCAAAA ACCGCCTATT TTTTCAGCTA TTAAAAAAGA CGGAGTTCGT
TTGTATGAAC ATGCACGTGC CGGAGAATCA ATCGAAATTG AAAGCAGAAA AACAACAATT
CACGAATTTG AAATCACCCG CATTGCATTG CCTGAAATTG ACTTTAGAGT AGTTTGCAGT
AAAGGAACTT ATATTCGTTC GCTTGCTTAC GATTTTGGAA AAGCAATGAA TTCAGGTTCG
CATTTAACCG TTTTACGCCG AACCAAAATT GGTGATTATG ATGTAAAAAA TGCGATTGAC
ATTACTTTAT TCGAAGAAAG TCTTCAATAG
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| Protein sequence | MTPEEYLEGQ VLLIDKPLKW SSFQAVNKLK YLLINKVGLP KKFKIGHAGT LDPLATGLLL
ICTGKFTKKI SELQGQAKEY TGTFYIGATT PSYDLETEID QTFPTEHINE VLIHETVKQF
LGEIDQKPPI FSAIKKDGVR LYEHARAGES IEIESRKTTI HEFEITRIAL PEIDFRVVCS
KGTYIRSLAY DFGKAMNSGS HLTVLRRTKI GDYDVKNAID ITLFEESLQ
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