| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0488 |
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| Symbol | |
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| ID | 5090001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 510609 |
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| End bp | 512279 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644739887 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001192842 |
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| Protein GI | 146298251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT TTAAAATTTT TAGTCTTGCC TTAGTTGCTA CAGCCTCTGT TGCAAAAGCG
CAGGATATCA AAGAAGCTAA AAAGGCAATT GATGCTGAGC AATTTCAAAA AGCAAAGTCG
TTGCTTAAAT CAATCATCAA AGCAAAACCA TCTGATGGAG AAGCTAATTT TGTTTTAGGA
AACGTATATT TAAATCAAAG CGTTGTTGAT TCTGCTAAGA TTTATTTTTT AAATGGAATA
GAAGCATCTG ACAAGAAAAA CTTAAACTAC ATTGGTTTAG GCCAGTTAGA TCTAGATAAT
AAAAATGTTG CTGGAGCTCA GGCTAATTTT GCTTTGGCTA CAAAAGACAT AAAGCGTAAA
GATGTAGATG AATTCATTTA CATTGGAAAA GCTTACATGA ACTCAGTGCA TCCTGATTAT
AACAATGCGA TTGCAAGTTT AAAGAAAGCA TTGGCAATTG ATCCTCAAAA TGCAACAGCG
CTTTTAGCTA TTGGAGATGC ATATTACGGA GCTAACAATC AAAACGAAGC TTACAAATCT
TACCGTGATG CTTTCACTGC AGATCCTACA CTTTTAAGAG CAAAAATGCA ATTAGGAGTT
TTATTAAAAG GAGCAAAATC GTATGATGAA GCTATTAAAG CTTTCAATGA AGTAATTGCC
TTAAACGCTA GTTATGGTCC AGTTTACAGA GAATTAGCTG AAACATACTA CAAATGGGGA
AGAAACAAAC CTTCTACAGC TAAAGTTAAC TTGCAAAATG CAATTACAAA CTACGAAAAA
TACTTGAGCT TAACAGATTA TTCTTTAGAT TCTAAAATGC GTCACGCAGA TTTCTTAATC
TTGGTTAAAG ATTACAAAAG CTTAGAAACT GTAGCAAACA AAATGATTGC TGAAGATAAA
GTAAATCCTA GAATTTTCAG ATATTTAGGA TATGCTGCTT ACGAAAACGG AAATGTTGAT
GTAGCTATTA AATCTCTTGA AGATTATATC AAAAATCCTT CTAACAAAGT GATCGGAAGT
GATTATATGT ATTTAGGACT TGCTAAAATC AAAAAAGGAA CTAATGCTGA AGGAGCAGTA
GATCAGGCTT CATTTGATGC AGGTATTGCT AATATTAAAA AAGCTGTTGA ATTAGAGCCA
TTAGTAGTTG AAGAACTTGG AGATTATGGT AAAGAATTAT TCGGTAAAAA GCAATGGGCA
CAAGCGGCGG CTATTTATGA ATTAAGTTCG TCTAATTCAG AATCAAAAAA CTATTTGACT
GATAATGTTT ACTACGGTAT CTCTCTTTAT TATGCCAATT TAGATAAAAA AGCGACTACG
CCAGAAGTAG CAGCTGATTT AGCTAAAGCA GATGCTGCTT TCGACAGAGT TTTAGTAGCT
TCTCCTTCTT ATGATGAAGC TTACCTTTAC AAAGGACGAA TAGGTAACTT ATTAGAGAAA
GAAGACCAGA TTGTTAAAAA CTACGAAACG TACGTTGCTA ACATTACAGC TAAAGGTGCT
GAAGAATTAG CAAAACCAGC TACAGTTAAG AAAATAGTTG AAGCATACAA TAGTATTGGT
GCTAGTTATG CAAATACTGA TAAAGCTAAA GCAATTGAAT ATTTTAATAA AACTTTAGTT
TTAGATCCAA CAAATGCTTA CGCTTCTCAA TCTGTGAAAG CTTTAAAATA A
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| Protein sequence | MNKFKIFSLA LVATASVAKA QDIKEAKKAI DAEQFQKAKS LLKSIIKAKP SDGEANFVLG
NVYLNQSVVD SAKIYFLNGI EASDKKNLNY IGLGQLDLDN KNVAGAQANF ALATKDIKRK
DVDEFIYIGK AYMNSVHPDY NNAIASLKKA LAIDPQNATA LLAIGDAYYG ANNQNEAYKS
YRDAFTADPT LLRAKMQLGV LLKGAKSYDE AIKAFNEVIA LNASYGPVYR ELAETYYKWG
RNKPSTAKVN LQNAITNYEK YLSLTDYSLD SKMRHADFLI LVKDYKSLET VANKMIAEDK
VNPRIFRYLG YAAYENGNVD VAIKSLEDYI KNPSNKVIGS DYMYLGLAKI KKGTNAEGAV
DQASFDAGIA NIKKAVELEP LVVEELGDYG KELFGKKQWA QAAAIYELSS SNSESKNYLT
DNVYYGISLY YANLDKKATT PEVAADLAKA DAAFDRVLVA SPSYDEAYLY KGRIGNLLEK
EDQIVKNYET YVANITAKGA EELAKPATVK KIVEAYNSIG ASYANTDKAK AIEYFNKTLV
LDPTNAYASQ SVKALK
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