| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0450 |
|---|
| Symbol | |
|---|
| ID | 5089964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 468025 |
|---|
| End bp | 468789 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644739844 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001192805 |
|---|
| Protein GI | 146298214 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAG TAAAAAATAT AGAAAAATCA TTTGGTGACA GTAAAGTTTT AAAAGGCGTT
TCGACGGTAT TTGAAACTGG AAAAACCAAC TTGATTATTG GACAAAGTGG ATCTGGAAAA
ACAGTTTTAT TAAAAACACT TTTAGGAATT CACACACCTG ACTCAGGAAC AATTGAATTT
GACGGAAGAG TTTATTCTGA TTTAGATAAA GACGAAAAAC GTGAATTAAG AACCGAAATC
GGGATGGTAT TTCAAGGTTC TGCATTATTT GACTCGATGA CAGTTGAAGA AAATGTGGCT
TTCCCGTTAA AAATGTTCAC CAAAAACAAC AAAGCACAAA TTCAGGAACG TGTTGATTTT
GTTTTAGAAA GAGTAAATCT GATAGATGCT CATAAAAAAT TACCTTCTGA AATTTCCGGA
GGTATGCAAA AACGTGTTGC GATTGCGCGT GCTATTGTAA ACAATCCGAA ATATTTGTTT
TGTGATGAAC CAAACTCAGG TCTGGACCCG AATACTTCAA CTTTGATTGA TAATCTGATT
CAGGAAATCA CGAAAGAATA CAATATTACT ACCGTAATTA ATACTCACGA CATGAACTCT
GTGATGGAAA TTGGTGAAAA TATTGTTTTC TTAAAAAAAG GATTAAAAGC CTGGCAGGGA
ACTAAAGAAG AAATCTTTAA AACCGACAAT AAAGATATTG TTAAGTTTGT ATACTCTTCT
AACCTGTTCA AGAAAGTACG TGAAGCATAT TTAAGAGGAC TATAA
|
|---|
| Protein sequence | MIEVKNIEKS FGDSKVLKGV STVFETGKTN LIIGQSGSGK TVLLKTLLGI HTPDSGTIEF
DGRVYSDLDK DEKRELRTEI GMVFQGSALF DSMTVEENVA FPLKMFTKNN KAQIQERVDF
VLERVNLIDA HKKLPSEISG GMQKRVAIAR AIVNNPKYLF CDEPNSGLDP NTSTLIDNLI
QEITKEYNIT TVINTHDMNS VMEIGENIVF LKKGLKAWQG TKEEIFKTDN KDIVKFVYSS
NLFKKVREAY LRGL
|
|---|
| |