Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0270 |
Symbol | |
ID | 5089838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 288646 |
End bp | 289200 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644739664 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_001192625 |
Protein GI | 146298034 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.301923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTA AAAACCTAAT TTTCAGCCTT TGCTTTTTGA TTCCGCTATT TGTTTTTCAG GCTTGCGGAC AAAACACAAA AAAACAACCT GCAAAAACAG CCGTTATGGA AAATAAAATC AGTAAACCCG GAAATCCTTA TTATTCAAAT ACAGATACAA CAAAACTCAA TGTAAGCAAC GCCGAATGGA AAAAAGTCCT TCCCGAAGAT GTGTATGCCG TAATGCGTGA GGCCGATACC GAAAGACCTT TTACCGGAAA ATATTGGAAT ACTGATGAAA AAGGAACCTA TTATTGTGCT TCATGCGGTA ACTTGCTTTT TAGATCGACA GCTAAATTTT CCAGCAGCTG CGGATGGCCG AGTTTCTTTG AACAGGAAAA CAAAAAAAGC ATTGTTTTTA AAGACGATAA TTCACTTGGA ATGGAAAGAA CAGAAGCGCT TTGCGGACGT TGCGGTGGAC ATTTAGGCCA TATATTCGAC GATGGTCCGG AACCAACCGG AAAACGTTAC TGCATGAATT CGATTGCTCT TGATTTTGTT CCGGATACTA AATAA
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Protein sequence | MKSKNLIFSL CFLIPLFVFQ ACGQNTKKQP AKTAVMENKI SKPGNPYYSN TDTTKLNVSN AEWKKVLPED VYAVMREADT ERPFTGKYWN TDEKGTYYCA SCGNLLFRST AKFSSSCGWP SFFEQENKKS IVFKDDNSLG MERTEALCGR CGGHLGHIFD DGPEPTGKRY CMNSIALDFV PDTK
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