Gene Fjoh_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0190 
Symbol 
ID5094518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp198416 
End bp198976 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content30% 
IMG OID644739582 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001192546 
Protein GI146297955 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.55176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTT ACATCAAAAA TATGGTGTGC GCCCGCTGTA AAATGGTCGT GAAGTCTGAG 
TTTGAAAAAC TCGGACTTCC TACTATTTCT GTTGAACTTG GCGAAGTAGA ATTAGAAAAC
GAAATAACCG AAGATCAAAA AGAAGCTTTA CTTAAAAACC TTCAGGATTT AGGTTTTGAT
TTATTAGATG ATAAAAAAAG TAAAACAATC GAGAAGATTA AAAATCTGAT TGTTGATTTG
GTTCATCATA AAAACAACGA ACTAAAAATT AATTTATCTG ATTATTTAGT CGAAAACCTC
AATCAGGATT ACAGCACATT AAGCAACTTA TTTTCTGAGA TTGAAAACAC AACTATTGAA
AAGTATTTTA TAAGCCAGAA AATAGAGAAA GTAAAAGAAC TTTTAATTTA CAATGAGCTT
TCCTTAAGTG AAATTGCTGA TCTTTTAAAC TACAGCAACG TAGCACATTT AAGTAATCAG
TTTAAAAAAA TTACGGGCTT TACTCCTACT TCATTCAAGC AATCAAAAGA TAAAATGCGT
ATTCAGATCG AGAATTTGTA G
 
Protein sequence
MTLYIKNMVC ARCKMVVKSE FEKLGLPTIS VELGEVELEN EITEDQKEAL LKNLQDLGFD 
LLDDKKSKTI EKIKNLIVDL VHHKNNELKI NLSDYLVENL NQDYSTLSNL FSEIENTTIE
KYFISQKIEK VKELLIYNEL SLSEIADLLN YSNVAHLSNQ FKKITGFTPT SFKQSKDKMR
IQIENL