Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0190 |
Symbol | |
ID | 5094518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 198416 |
End bp | 198976 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644739582 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001192546 |
Protein GI | 146297955 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.55176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTT ACATCAAAAA TATGGTGTGC GCCCGCTGTA AAATGGTCGT GAAGTCTGAG TTTGAAAAAC TCGGACTTCC TACTATTTCT GTTGAACTTG GCGAAGTAGA ATTAGAAAAC GAAATAACCG AAGATCAAAA AGAAGCTTTA CTTAAAAACC TTCAGGATTT AGGTTTTGAT TTATTAGATG ATAAAAAAAG TAAAACAATC GAGAAGATTA AAAATCTGAT TGTTGATTTG GTTCATCATA AAAACAACGA ACTAAAAATT AATTTATCTG ATTATTTAGT CGAAAACCTC AATCAGGATT ACAGCACATT AAGCAACTTA TTTTCTGAGA TTGAAAACAC AACTATTGAA AAGTATTTTA TAAGCCAGAA AATAGAGAAA GTAAAAGAAC TTTTAATTTA CAATGAGCTT TCCTTAAGTG AAATTGCTGA TCTTTTAAAC TACAGCAACG TAGCACATTT AAGTAATCAG TTTAAAAAAA TTACGGGCTT TACTCCTACT TCATTCAAGC AATCAAAAGA TAAAATGCGT ATTCAGATCG AGAATTTGTA G
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Protein sequence | MTLYIKNMVC ARCKMVVKSE FEKLGLPTIS VELGEVELEN EITEDQKEAL LKNLQDLGFD LLDDKKSKTI EKIKNLIVDL VHHKNNELKI NLSDYLVENL NQDYSTLSNL FSEIENTTIE KYFISQKIEK VKELLIYNEL SLSEIADLLN YSNVAHLSNQ FKKITGFTPT SFKQSKDKMR IQIENL
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