Gene Fjoh_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0170 
Symbol 
ID5094498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp175574 
End bp177148 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content37% 
IMG OID644739562 
ProductNa+/H+ antiporter 
Protein accessionYP_001192526 
Protein GI146297935 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATA ACTTCCCTTT CTACCTTGGT CTGTTAATTG TTATTTTACT GCTCATTATG 
CTGGCCAATA AAATAAAAGT AGCTTATCCT GTACTTCTGG TACTTGCAGG ATTGTTAATC
AGTTTTATTC CGGGTGTACC TTCAATCAAC ATCGAACCAG AGCTCATCTT CTTTATTTTT
CTTCCGCCAT TATTATATGA AGCTGCCTGG ACAATTTCAT GGAAAGAATT GTGGCGCTGG
AGACGTATTA TAACGAGTTT TGCTTTTATC GTTGTTTTTG TTTCAGCACT TTCTGTTGCG
CTGGTTGCGA ATTATTTTAT TCCGGGCTTT TCATTGGCAT TAGGTTTTGT TTTAGGAGGA
ATTGTTTCTC CTCCAGATGC TGTAAGTGCC GGTGCAATTT TAAAATTTGT CAAAGTACCC
AAAACCATGT CGTCGATTTT AGAAGGCGAG AGTTTATTAA ATGATGCCTC TTCCCTTATT
ATTTTCAGAT TTGCCATGAT TGCCGTTGCA ACAGAACAAT TTATATTTTA TAAAGCGGCA
TTAAGTTTCA GCTGGATGGT TTTTGGCGGC GCTGGTATTG GTTTATTAAT AGGATGGCTG
TTTATGAAAG CACATAAATA TCTGCCAACC GATGCCAACA GCGATATTGT TTTATCATTG
TTAACGCCTT ATATTATTTA TCTCGCAGCC GAAGAAGTTC ATAGTTCAGG AGTACTGGCT
GTAGTAAGCT GCGGTTTACT TTTGTCTAAT AACCGACACC GTTTTTTAAA CAGCAGATCG
CGTATACAAG GCGTAAATGT GTGGGAAAGT CTCTGTTTTA TACTAAACGG ATTGGTCTTT
ATGCTGATTG GATTAGATTT GCCTCAAATT ACTAAAGGAC TGGAAGAAAC TACGCTTTTA
ACAGCAATAG GTTATGGCGT TCTGATTACG GTTGTTTTAA TTATTAGCAG GCTCATATCT
GCTTATGGTG CCGTAATTGT AACACTTATC GCCCGAAATT TTATTACTGT AGCAGACAAT
AGACATCCCG GTTATAAAAC GCCTTTTATA TTAGGCTGGA CCGGAATGCG CGGTGTTGTT
TCATTAGCAG CAGCATTATC TATTCCGGTT TATCTGGACA ATGGCAACGG ATTTCCGCAG
CGAAACCTCA TCTTGTTTAT CACCTTTATC GTTATTCTTT TAACCTTATT GATTCAGGGA
TTGACGCTTC CGTATTTTAT CAAAAAAATC AAACTTCCAA ACATCTACGA TCCTGTTCCC
CGCGAAGAAG CGCATCACCA GATACGACAA GAATTGGCTG AATTTGCGTT ACTTTACTTA
AAAACCAATT ATCAAGATCA TGCCGAAAAC AATACTTCAT TACAGCATCT TATTCAAAAA
TGGGAACAGC ATATTAAAGG AATTGATGAT GAATCCATAA GTCAGGAACT CAAAAATATT
TATCGGGATT TATTAGACCA GCAGAGACAA TGGCTTTTAA ATAGAAATAA AGAAGACAAA
ACTTTAGACG AAGCTATTAT ACGCAGACAA ATGTATTATC TTGATATTGA AGAAGAAAAA
CTGCGATATC TTTAA
 
Protein sequence
MLDNFPFYLG LLIVILLLIM LANKIKVAYP VLLVLAGLLI SFIPGVPSIN IEPELIFFIF 
LPPLLYEAAW TISWKELWRW RRIITSFAFI VVFVSALSVA LVANYFIPGF SLALGFVLGG
IVSPPDAVSA GAILKFVKVP KTMSSILEGE SLLNDASSLI IFRFAMIAVA TEQFIFYKAA
LSFSWMVFGG AGIGLLIGWL FMKAHKYLPT DANSDIVLSL LTPYIIYLAA EEVHSSGVLA
VVSCGLLLSN NRHRFLNSRS RIQGVNVWES LCFILNGLVF MLIGLDLPQI TKGLEETTLL
TAIGYGVLIT VVLIISRLIS AYGAVIVTLI ARNFITVADN RHPGYKTPFI LGWTGMRGVV
SLAAALSIPV YLDNGNGFPQ RNLILFITFI VILLTLLIQG LTLPYFIKKI KLPNIYDPVP
REEAHHQIRQ ELAEFALLYL KTNYQDHAEN NTSLQHLIQK WEQHIKGIDD ESISQELKNI
YRDLLDQQRQ WLLNRNKEDK TLDEAIIRRQ MYYLDIEEEK LRYL