Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0048 |
Symbol | |
ID | 5091030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 54263 |
End bp | 55111 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644739436 |
Product | transketolase domain-containing protein |
Protein accession | YP_001192405 |
Protein GI | 146297814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTA ACACACAACA ATTAAGCGAT TTAACGATCC AAGTAAGAAG AGATATTCTT AGAATGGTAC ATGCTGTAAA CTCTGGACAC CCAGGTGGTT CTTTAGGTTG TACTGAATTT TTGGTAACAC TATATCAAAA TATAATGGAC CGCAAAGAAG GTTTTGATAT GGACGGAATT GGAGAAGATT TATTTTTCCT TTCAAACGGA CACATCTCTC CTGTCTTTTA CAGCGTTCTG GCACGCAGCG GTTATTTTCC AGTTTCAGAA TTAGCTACAT TCAGATTATT AGATTCTCGT TTACAGGGAC ACCCAACTAC TCACGAAGGT TTACCTGGAG TTCGTATTGC GTCTGGTTCA TTAGGACAAG GTTTATCTGT AGCTCTTGGA GCAGCGCAAG CTAAAAAATT AAACAAAGAC AATCATATTG TATATAGTTT ACACGGAGAC GGAGAATTAC AAGAAGGTCA AAACTGGGAA GCTATTATGT ACGCTTCTGC TAAAAAAGTA GACAACATTA TTGCAACAAT CGACCTTAAC GGAAAACAAA TCGACGGAAC AACCGATGAA GTTTTACCAA TGGGAAGTAT CCGCGCTAAA TTTGAAGCTT TTGACTGGGA TGTTTTAGAA ATTAAAGAAG GAAACAGCAT TGATGCTATC ATCGCTGGTT TAACTGATGC TAAATCAAGA ACAGGAAAAG GAAAACCAGT TTGTATTTTA TTACATACAG AAATGGGTAA TGGTGTAGAT TTCATGATGC ACACTCATGC TTGGCACGGT AAAGCACCAA ACAATGACCA ATTGGCTAGT GCTTTAGCTC AAAACGTTTC AACTTTAGCG GATTATTAA
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Protein sequence | MKPNTQQLSD LTIQVRRDIL RMVHAVNSGH PGGSLGCTEF LVTLYQNIMD RKEGFDMDGI GEDLFFLSNG HISPVFYSVL ARSGYFPVSE LATFRLLDSR LQGHPTTHEG LPGVRIASGS LGQGLSVALG AAQAKKLNKD NHIVYSLHGD GELQEGQNWE AIMYASAKKV DNIIATIDLN GKQIDGTTDE VLPMGSIRAK FEAFDWDVLE IKEGNSIDAI IAGLTDAKSR TGKGKPVCIL LHTEMGNGVD FMMHTHAWHG KAPNNDQLAS ALAQNVSTLA DY
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