Gene Fjoh_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0031 
Symbol 
ID5091013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp36826 
End bp38595 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content27% 
IMG OID644739419 
Productputative signal transduction histidine kinase 
Protein accessionYP_001192388 
Protein GI146297797 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0655535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA AAAGTTTTTT TATTAATCAT TCCATAAAGT CTTTGTATAT AGGCTTAATT 
CTTATCTCAT TTATTGGGGC TGTTTTTTTT ATAAATCCCA ATGAGAAGAC AGTTGAGAAA
AAAAGCAAAA AGAAATATCA AGCAATAGAA CTTGATAAGC TTATAGAGAA AGCTGATAAA
TATTATGATG AAGAAAAACT AGACAGCTCT TATTATTTTT ATAATAAGGT TTTACCAATG
TATGATCCAG AAATTGATTA TACAAAGTAT GTTTATACGC TGTCTTCGAT GGCTGAAATA
CAAACACTTA TTGGTAATTT TATTGAAAGT GAAGAATTAT TGACAAAAAC CCTTCCTTAT
TTAAGTAAAA TTAAAGAGCC TATTTATGCT CGAAATGTTT ACAGTAATAT GGGAATGAAT
TATTATAATA CTTATGATTT TGAAAATTCG CTTTTTTACC ACACAAAAGC ATTAAAATTA
CCTGGCACAC CCTATAAAAA GGCTATTGTT TTAAACGACA TAGCTCGTGT ATATATGGAA
CAAAACCGTT ACGATATAGC TGCAGAAATA CTAGAAATGC TGACTGCAAG AAAAATAGTT
TACAAAAGAG AACCTCTGTT AAGTGATTAT TTTTATGCTT CTTTGCAGAA CAGTCTTGGA
GTCTGTTATT TTAATTTAAA AAAACCTAAA GCATTAGATC TTTATCTCAA AAGTTTAGCA
ACCACCTTAC AGGGAACTAA TAAGTTCATA TTGCTTAATA ATTATAAATC TCTTTCTGAT
TACTACATGG AAAATAATCC TGAGCTTGCT TTACAGTACG CAAAGAAATC CTACGAAACA
GCAAGGGAAG TAAATGCTAA CAGTGCCAAA ATGGAACTAC TTGCTTATTT AATAAAGCTT
AGTAAAGGAT CTGAGTTAAA AAAATATACT ATAGATTATA TAAAACTGAC TGACAGTGTA
ATTAATTCTA GAAAATCGGC TAGAAATCAA TTTACAAACA TCAAATATTA CTCAAAAATA
AATAAAGACG AGAATTTACA CCTTAAAGCA GAAAAAGCAG AAAACGAACT TAAACTTCAG
CAGCATAAAA CCAGCAATAT AATTTCGGGG GTAATAATAA CTTTTATTTT AACATTGTGC
ATCATACTTA GTTTTTACTT ATCAATAAAA GGGAGGAAAC AAAAAAACAA TGCCATACAA
GAAAGTGAAA CCCGGATTTC TAACAAATTA CGCAATGAAC TTTTAAATGA AGTTCAGAAT
GTTTTAACAT ATGCTAAAAA TAATGATTTA GAAACTGCTG ATAATAAAAA TGAATTATTA
GAAAGTCTCG AAAAAATCTA TTCTCAAACC AGAAATATCT CAAAAGAAAA CAGCGATATT
ATAACTGATA AAAGATACAG TTTGACATTG AAAAATATGA TATCTACTTT TAAAACAACA
GATACAAATG TTTTTACAAA TGGCCTTACT GATATTAACT GGATTAAAAT TGATAAAAAC
AAAAAAATAA TTATTTACAG AGTCATACAA GAACTACTTG TAAACATGAA AAAACACAGC
AGCGCAACAC TTGCTGGAGT TAATTTTAAA GTCATTAAAA AAAATATTAT TATAAATTAT
ACAGATAATG GTAAAGGTGT TAACATGAAC CAAGTATCTA AAAGTGGTCT TCAAATAATT
GAGAATCGTA TTTTAAATGT AAAAGGTGAA ATTCAATTTG AATCAAATCC CGACAATGGA
TTTAAAATAT CAATTAAAAT TCCTTTTTAA
 
Protein sequence
MSKKSFFINH SIKSLYIGLI LISFIGAVFF INPNEKTVEK KSKKKYQAIE LDKLIEKADK 
YYDEEKLDSS YYFYNKVLPM YDPEIDYTKY VYTLSSMAEI QTLIGNFIES EELLTKTLPY
LSKIKEPIYA RNVYSNMGMN YYNTYDFENS LFYHTKALKL PGTPYKKAIV LNDIARVYME
QNRYDIAAEI LEMLTARKIV YKREPLLSDY FYASLQNSLG VCYFNLKKPK ALDLYLKSLA
TTLQGTNKFI LLNNYKSLSD YYMENNPELA LQYAKKSYET AREVNANSAK MELLAYLIKL
SKGSELKKYT IDYIKLTDSV INSRKSARNQ FTNIKYYSKI NKDENLHLKA EKAENELKLQ
QHKTSNIISG VIITFILTLC IILSFYLSIK GRKQKNNAIQ ESETRISNKL RNELLNEVQN
VLTYAKNNDL ETADNKNELL ESLEKIYSQT RNISKENSDI ITDKRYSLTL KNMISTFKTT
DTNVFTNGLT DINWIKIDKN KKIIIYRVIQ ELLVNMKKHS SATLAGVNFK VIKKNIIINY
TDNGKGVNMN QVSKSGLQII ENRILNVKGE IQFESNPDNG FKISIKIPF