| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2296 |
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| Symbol | |
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| ID | 5104247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2189967 |
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| End bp | 2191196 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640508195 |
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| Product | hypothetical protein |
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| Protein accession | YP_001192357 |
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| Protein GI | 146305041 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.414005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGT ACGTAATTGG CGTTGACGAT CACGATTCCC CAGAGGGCGG ATGCACCACA
CATTTTTCCT CGCTTTTATT GAAAGAGTTT AACAAGGCTA ACGTAAGGGT TGTGGGATAT
CCTAGGTTAA CTAGGCTGAA CCCCAACATA CCCTGGAAAA CCAGGGGGAA CGCCTCAGTC
TCATTCGTGG TGGAGACTGA GAGGGACCAG GCGGAACTCC TTGAGATGGT CTGGAGCGAG
TCCATGAACT ACGTGGAGAG GGTGTCCAGG GGATTACTGT ACAAGAGGTC TCCCGGCGTT
TCTGTGGGAA AGGTTGAGGT GATGGGGGAG CTGGAACACC TCTACTGGAA GGCGGTCAGC
GACGTGGTCA CGCTGGATTA CGTCAAGAAC GTTTCGGAAA GGCTTGGGAT CCTTACCACG
GGAGGTAGGG GGGTGATAGG GTCCATGGCC TCCATGGGAT TTTCAGGTAA TGGAACCTAT
GAACTAGTAA CGTACAGGGC CCAGGAAAAC TGGGGGAGGA GAAGGGAGTT GGACCTATCC
TCCCTGATAG AGTATGACGA GAGATATTTT CCAAGGGTGT ATGCGAATGT GGACTACGTG
GACATGGAAC CACTGGTCCT GTCTCACGGA AGGGATCCCG TGCTGTTTGG TCTTAGGGGA
ACCGATCCAG TCGCGTTGGT GGAAGGAATG AAGAGATTGA AGGTGAACGA GGAAGCGGAA
TCGTATGTGG TGTTCGTAAC TAACCAGGGA ACTGATCACC ATTTTCGGAA CCCTAAACTT
AGGCCGTACT CCAGTTTCGT GGGAGAAGTT ACCGTGAATT CTGTGAGGGT GGAAAGGGGA
GGAGACTGCG TCGTGATAGG GGATGACCTG GTGATGCTGG TGTACAAGGA AACCGGGGAG
TTAAACAGGG CCGTAAGGGA GTTATTGCCT GGAGATAGGA TCAGGGTCTA TGGAGCTGTC
AAGCCGTCGG TTAGGTACGG GGTTGTGATA GAACCGGAAA AGGTGGAGAT CCTGAACTTG
GTGCCAAAGG TGGAGGTAAA CAATCCTAGA TGTCCCATCT GCGGAGGCTC CTCCGAGTCT
GCCGGTAAGG GGAAGGGATT TAGATGCAGG AGGTGTGGGC ACAGGTTTGC GGGGGAGAAG
GTGGTGAGGG AAGTGGAAAG AGGAATCAGT CTAGGAGTGT TTCAGACGAG GAAGTACAGA
CACCTAACGA AGCCGATTTT TTATGAGTAG
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| Protein sequence | MNMYVIGVDD HDSPEGGCTT HFSSLLLKEF NKANVRVVGY PRLTRLNPNI PWKTRGNASV
SFVVETERDQ AELLEMVWSE SMNYVERVSR GLLYKRSPGV SVGKVEVMGE LEHLYWKAVS
DVVTLDYVKN VSERLGILTT GGRGVIGSMA SMGFSGNGTY ELVTYRAQEN WGRRRELDLS
SLIEYDERYF PRVYANVDYV DMEPLVLSHG RDPVLFGLRG TDPVALVEGM KRLKVNEEAE
SYVVFVTNQG TDHHFRNPKL RPYSSFVGEV TVNSVRVERG GDCVVIGDDL VMLVYKETGE
LNRAVRELLP GDRIRVYGAV KPSVRYGVVI EPEKVEILNL VPKVEVNNPR CPICGGSSES
AGKGKGFRCR RCGHRFAGEK VVREVERGIS LGVFQTRKYR HLTKPIFYE
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