| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2212 |
|---|
| Symbol | |
|---|
| ID | 5105432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 2122406 |
|---|
| End bp | 2123287 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640508105 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_001192274 |
|---|
| Protein GI | 146304958 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000352659 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC CAAGGTTGCT ATATTTAAAC GAGACTGTGC AAAAATTTGG TGTCTTCAAG
GCTAACTCCC CATTCGCTAT CCTGGGAATT CCCATGGATA TAACCAGCAG TTTTAGGCCA
GGGAGCAGAT TCGCACCACA GAAAATAAGG CATGTGTCTC AATTCATTGA GTTTCTTTCC
ATAAGGTCTG GCGTGGATAT GTCAGAGATA GGATTCCAAG ACTATGGCGA CGTGATATTG
CATCCATCGG ACGTCGAGGA AAATGTGGAG AGAATATCTC AGGTAGTGAG CTACATTTCT
GATCAAGGTA AGATCGTTGT ATCCATAGGT GGTGAGCATA CGGTCACTGT AGGGACTGTT
ATTGGAGCTA GAGCCGATTG CGTGCTCAGT TTCGACGCTC ACCTAGATCT TAGGGACGAG
TATATGGGAT ACAAGTACGA TCATGCATGC GTCCAAAGAA GGTTGAGCGA AAGAGGCGTA
AAAATAATGG AAATAGGAAA TAGAGCTATG GGAAGAGATG AAATAGAGTA TGCTAAGGCC
AGTAACGTTC CCTTCATAAC GTCACACGAG GTAAAGCTAC TAGGTCCCAG GGAAGTTGCA
ATGAGAGCTA TAAACTTCCT TAAGCCCTGT AACAGGATAT ATATTACGTA TGATATGGAT
GCAATAGATC CCGCCTATGC ACCAGGAGTT GCGACGCCTG AACCCGAGGG TCTTGATCCA
TCGACGGTCT TGGACATAAT GAACCTTGTA GTGGACAGAA GGGTAGTGGG ATTTGACGTA
GTTGAGGTAT CCCCTTCTTA CGACCCGTCT GAAATAACCT CAGTACTTGG AGCAAAATTA
ATACTAGAGA CTGCTGCAAA ATTGAAAACT AAATTGCCTT AA
|
|---|
| Protein sequence | MSDPRLLYLN ETVQKFGVFK ANSPFAILGI PMDITSSFRP GSRFAPQKIR HVSQFIEFLS
IRSGVDMSEI GFQDYGDVIL HPSDVEENVE RISQVVSYIS DQGKIVVSIG GEHTVTVGTV
IGARADCVLS FDAHLDLRDE YMGYKYDHAC VQRRLSERGV KIMEIGNRAM GRDEIEYAKA
SNVPFITSHE VKLLGPREVA MRAINFLKPC NRIYITYDMD AIDPAYAPGV ATPEPEGLDP
STVLDIMNLV VDRRVVGFDV VEVSPSYDPS EITSVLGAKL ILETAAKLKT KLP
|
|---|
| |