| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2176 |
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| Symbol | |
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| ID | 5105397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2090436 |
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| End bp | 2091005 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640508069 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001192239 |
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| Protein GI | 146304923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000305264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAACGCCT TACTTGTGAT CTTCGGCTTA GCGCTGGGGC TGTCGCTAGC TGCTCCCCCA
GGTCCAGTGA ACTCCATGAT AGCCTCAGAG TCTCTAAGGT CAAAGTTACA TGGGGTTAGC
GTAGGCCTTG GGGCCATGAC AGCTGACCTA GTCTTCTTCA TTTTAACTCT CGTATTTGGA
GACTTTTTGC CGAGAGATGT AAGGTATATT TTCTACTTGA TTGGGGGAGC CTTGATGATA
TGGTTAGCCT TCGGAGTGAT GAAATCTACC TTGTCTAATA GAACCACTAG GGCCAATTAC
TTGACGGGGC TAACCATGGG TCTAACCAAC CCCTTTCAGA TAACCTGGTG GCTGACTAGT
GGTCTATTCA TGGTCCAGGA ATTTGGGATC CTAGTAATAC CAGGTTTCTT TGGCGGGATA
GTAATATGGA TTACCTTATT TCCATTTCTA GTAAATAAGT TTGGGAAAAG GATAGCAAGG
GCTATAAAAA TAGCTTCATT TGTTATATTA CTTGGATTTG GAATCTATAT TCTAGTTCAA
GGAGCTCTTC TCATAACCCA GATATTATAG
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| Protein sequence | MNALLVIFGL ALGLSLAAPP GPVNSMIASE SLRSKLHGVS VGLGAMTADL VFFILTLVFG
DFLPRDVRYI FYLIGGALMI WLAFGVMKST LSNRTTRANY LTGLTMGLTN PFQITWWLTS
GLFMVQEFGI LVIPGFFGGI VIWITLFPFL VNKFGKRIAR AIKIASFVIL LGFGIYILVQ
GALLITQIL
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