| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2161 |
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| Symbol | lysS |
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| ID | 5104900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2075586 |
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| End bp | 2077076 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508052 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001192224 |
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| Protein GI | 146304908 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000571826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGGCTA TGAAATGGGA CGAGAGGAGA ATCCAAGTTT TAGAGGAACT TAGAGCTCGC
GGAGTAAACC CTTACCCACA GAAATATCCA ATTACTCACA CGGTAGTTCA GTTGAGACAG
ATAGGGAACC AGAGACAGGA CAAGCCCAAG GATCCCTTCC TTACAGGAGT TAGGACAGCT
GGAAGGGTGG CCAATCTCAG AAGGCACGGG AAAGCCTCGT TCGTCGATAT ATTTGATGAT
GGGGAGAAAC TTCAGCTATA CCTGAGGGTA AATGAGCTTG GTGACAAGTA TGAGTATTTC
TTCAAGGTCG TGGATAGGGG AGACATAATA GGCATTCAGG GGGATCTGTT TTTCACGGCA
AAGGGAGAGC TAACACTGCT GGTTAAGGAT TTTGCCATGC TTGCCAAATC CTTGATAGAG
CCCCCTGATT GGTCTACGAT GAGCCCGGAG TTTAGGTATT CCCACAGATA CGTTGATTTC
CTATATAACG ACAATGCGAG AAGGTTTATG GAAACCAGGT TCAAGATCAT CAGGGAAATA
AGGAACATAC TTGGAGAGGA GGGTTTTATT GAGGTGGAGA CTCCAATTCT TCAACCTGTG
TATGGAGGTG CCCTGGCTAG ACCTTTCAAA TCTCACGTTA ACTACCTTAA TGAGGACTGG
TACCTCAGAA TCTCCTTGGA ACTTTATCTG AAGAGGTTCA TTGTGGGAGG CTTCAATAAG
GTCTTTGAGA TCGGAAAGGT ATTCAGGAAC GAGGATATAG ATGTCACTCA CAACCCAGAG
TTCACGCTCA TGGAGCTATA CTGGGCCTAC GCTGACTATA ACGATATCAT GGATCTCACA
GAGAGGTTAT TCAAACAGCT AGCTGATAGG GTTCTTCACT CCACCAAGAT ACCCTACAAG
GTTGGGGAGA AAACTGTGGA GATCAACCTG GAAAGCTTCA GGCGCGTCTC CATGTACGAT
TCCCTGTCAG AGGCCCTTGG GAAGAACGTG GAGGAGATGA CCGATGACCA GCTTAAGGAA
TTGATGCAGA GGAACGGGCT GGTTCCAAGG GGTTCACTGT ATATCCGAGG TCTTATGATC
GAGAAGTTAT TTGATAAACT CGTCACACCT AGCCTAGTTC AACCTACTTT CGTGACTGAC
TATCCCATAG AGACTACCCC ACTTTGCAAG CCTCACAGAA ATAAGCCAGG ACTTGTGGAG
AGATTCGAGC TCTACATTGC AGGAGTGGAA TTCGCCAATG CCTACACGGA GCTCAACGAT
CCCATTTTAC AGGACAAGCT GTTCAGGGAA GAGCAGGACA TGATGAAACG TGGCGACCAA
GAGGCACATC CCTACGATAA GGATTTCATA AACGCCTTAA GTTACGGTAT GCCACCCACG
GGAGGCTTGG GGATTGGTAT TGACAGGCTC GTGATGCTTT TCACCAATAA CCAGAGCATA
AAGGAAGTTA TTCCATTCCC CATGGTCAGC TCGAAGCTTA TTGAGGAATA A
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| Protein sequence | MLAMKWDERR IQVLEELRAR GVNPYPQKYP ITHTVVQLRQ IGNQRQDKPK DPFLTGVRTA
GRVANLRRHG KASFVDIFDD GEKLQLYLRV NELGDKYEYF FKVVDRGDII GIQGDLFFTA
KGELTLLVKD FAMLAKSLIE PPDWSTMSPE FRYSHRYVDF LYNDNARRFM ETRFKIIREI
RNILGEEGFI EVETPILQPV YGGALARPFK SHVNYLNEDW YLRISLELYL KRFIVGGFNK
VFEIGKVFRN EDIDVTHNPE FTLMELYWAY ADYNDIMDLT ERLFKQLADR VLHSTKIPYK
VGEKTVEINL ESFRRVSMYD SLSEALGKNV EEMTDDQLKE LMQRNGLVPR GSLYIRGLMI
EKLFDKLVTP SLVQPTFVTD YPIETTPLCK PHRNKPGLVE RFELYIAGVE FANAYTELND
PILQDKLFRE EQDMMKRGDQ EAHPYDKDFI NALSYGMPPT GGLGIGIDRL VMLFTNNQSI
KEVIPFPMVS SKLIEE
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