| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2143 |
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| Symbol | rpl13p |
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| ID | 5104882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2060992 |
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| End bp | 2061435 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640508034 |
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| Product | 50S ribosomal protein L13P |
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| Protein accession | YP_001192206 |
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| Protein GI | 146304890 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000325163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000323505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTGAAA CTGTTATTGT GGATGGAGAG GGCCAGATAT TGGGTAGACT GGCCTCAAAG
GTAGTTGGAT TACTAAAGGA AGGGAAGAGG GTCGTAATAG TTAATGGGGA GAAGATAGTA
ATAAGCGGTC CCAGGAATAG GGTGGTAAAC GGGTACATGT TGCTTTTCAG TGTTGGGACG
CTGTTCAATC CCTATAAGCT AGGTGTTAGG AGACCTAGGA CTCCAATCAA CATTGTGAAG
AGGACCATCA GGGGCATGTT ACCCAAGACC CATAGGGGTG AGACCATGTT AAAAATGGTC
AAGGTCTATG TTGGAATCCC GAAAGAGTTG CAGGGTAAAG AAATGATGAA ATTTGAAGAC
GCGAACGTAG CAAGATTAAA AGGCAAGTAT ATCACAGTTG GTGAGTTGTC TAAGATTTTG
GGGTGGAAGG GAAATGTCAA CTGA
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| Protein sequence | MTETVIVDGE GQILGRLASK VVGLLKEGKR VVIVNGEKIV ISGPRNRVVN GYMLLFSVGT
LFNPYKLGVR RPRTPINIVK RTIRGMLPKT HRGETMLKMV KVYVGIPKEL QGKEMMKFED
ANVARLKGKY ITVGELSKIL GWKGNVN
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