| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2121 |
|---|
| Symbol | |
|---|
| ID | 5104414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 2040695 |
|---|
| End bp | 2041513 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640508010 |
|---|
| Product | competence damage-inducible protein A |
|---|
| Protein accession | YP_001192184 |
|---|
| Protein GI | 146304868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.240966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTA TTATTATGCG TATGCTATAT ACGGCAGAGA TATTAACTAT AGGAAATGAG
CTACTGACTG GCAGAACTGT AAATACCAAT GCCTCTTACA TAGCTTCAAG GCTAACACTC
ATGGGTTTCT CCGTTAGAAG GATCACTGCG ATTAGGGATG AGCTAGAAGA AATAGCTAGT
GTGATAAAGG AAATCCTGGG GAGGAGTCCT GCCATTGTGG TAGTCAGTGG GGGATTAGGA
CCCACATACG ATGATATGAC AGCGGAAGGT ATTGCCAAAG GTCTAGACCG GAAACTAGTT
ATGAATGAGG ATGCCCTAAG GGAACTAAGG GAGAAGTACC AAACCAGGGG CCTACCCTTG
ACCCAGGAGA GGCTAAAGAT GGCCCTACTG CCTGAAGGGG CAAAACCCAT AAGGAACGAG
GCTGGGATTG CACCGGGCTT CACGCTCAAC GTTAACGGGA CCGACATTGT GGCCACTCCA
GGCGTGCCAA GGGAAATGGA GAGCGTCCTG GAGAGCTTCC TAAACCACAT GCTAACTAGA
CGTCCTCCTG TATACTATTA CGAAGAGAGT TTCCTGGTAA GGGGAGTTAT GGAGTCCACT
CTGGCTCCCC ACATAAAGGG GATAGTTAAG GAAACCGGAG TCTACATAAA GACCCATCCA
AAGGGGCACG AAACTAGCGA ACCCTATCTG GAAGTTCAAA TAGCGTATAG CGGTGAGAAT
CCTGATAGAG TGAAGGAGAT TGTGAGGAGT GTGAAAGAAA GGGTAAAGGC CGTAGTCAGG
GAATTGGGTG GGACGCTAGA TAGAGTTCAG AATCCTTAG
|
|---|
| Protein sequence | MAFIIMRMLY TAEILTIGNE LLTGRTVNTN ASYIASRLTL MGFSVRRITA IRDELEEIAS
VIKEILGRSP AIVVVSGGLG PTYDDMTAEG IAKGLDRKLV MNEDALRELR EKYQTRGLPL
TQERLKMALL PEGAKPIRNE AGIAPGFTLN VNGTDIVATP GVPREMESVL ESFLNHMLTR
RPPVYYYEES FLVRGVMEST LAPHIKGIVK ETGVYIKTHP KGHETSEPYL EVQIAYSGEN
PDRVKEIVRS VKERVKAVVR ELGGTLDRVQ NP
|
|---|
| |