| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2084 |
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| Symbol | |
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| ID | 5105064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2002659 |
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| End bp | 2003594 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507974 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001192148 |
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| Protein GI | 146304832 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.305359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.763617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAAGGG TTAGTGATAC TGTAGTTAGA ACAATAAACA TGGTCCACTA TCAACAGACC
AACTTCATGG GAAGGCTTCA CGGGGGCGAT ATGCTGAAGT TCCTGGCAGA TGCGGGCATG
CTAGCATCCA TGAAGGTGAG CAAGGGCCTA ACCGTACTGG CCTCCCTAGA TCAGGTTCTC
TTCAAGAAGG GGGCAAACCT AGGGGACATA GTCTTCGTGG ACGCTCGAGT TCTATACGTA
GGTAATTCAT CCATGGAGGT GGAAATGAGG GCATCTAGAG GATCTGAGGT TATAGTAACC
GCCAGTGGAA CTTACGTTAA GGTTAACCAG GACTTCAGGC CTGTCCCAGT GGGCGAGAAG
GTGATGGGTG AGACGGAGGA AGAAAGAGAG GCAATTGAGC TTGCCATACA AAGGAGAAAC
GACAAGATTC AGAAAATCAG AAACAAGAAA GAAATTGCCT GTTCTGAGGA CCCAACCAAT
TTTTTGAGGT ATAGGCTGAG TAACACTATC TTCGTCGGCC CAAACATGAC CTATGACGGA
AGGGTGATGT CGGCTGGAAT GCTCCTCAAG GCCATGGATG ACCTAGGAGG GACACTGGCG
TTAAGATATA ACGGCATAGA AAACTACAGA CCGGATCAGG ACGGAGTTGT CACTGTTGCG
GTATCCGACA TTTTCTTCTA TTCCCCCATA AGGCTAGGGG ATATAGTGGA AATGAACGCG
GGGATAACAT ACGTAGGCAA GACGTCCATA GACCTCCTGA TAAATGTGAA CAGGTTAGAT
GAAACCACAC AAGAGTGTAA ACACGTGACA ACGGCATACT TCACGTATGT GAGGGTAGAT
CCTCAAGGAA ATAAGAAGGA AATGCCCAGA TACGTTCCAC AGACGCCACA TGAAATAGAG
CTGTGGAACG AATCAGTTAG AAGAAGGGGA AGATAA
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| Protein sequence | MLRVSDTVVR TINMVHYQQT NFMGRLHGGD MLKFLADAGM LASMKVSKGL TVLASLDQVL
FKKGANLGDI VFVDARVLYV GNSSMEVEMR ASRGSEVIVT ASGTYVKVNQ DFRPVPVGEK
VMGETEEERE AIELAIQRRN DKIQKIRNKK EIACSEDPTN FLRYRLSNTI FVGPNMTYDG
RVMSAGMLLK AMDDLGGTLA LRYNGIENYR PDQDGVVTVA VSDIFFYSPI RLGDIVEMNA
GITYVGKTSI DLLINVNRLD ETTQECKHVT TAYFTYVRVD PQGNKKEMPR YVPQTPHEIE
LWNESVRRRG R
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