Gene Msed_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2065 
Symbol 
ID5105045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1984560 
End bp1984952 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID640507955 
Productiron dependent repressor 
Protein accessionYP_001192129 
Protein GI146304813 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAA GCGAAAGGGA GATTGTTTAC CTTTCGGCAA TAAGGGAAAT GAATGATAAG 
GGCCAGCCTG GTAAATTATC CATAATAGCA AAGCAAATCG AAGTTTCCCC TGCAAGTGCC
TTTGAGGAAC TGAAACATCT AGAGAAAAAG GGTCTTATCT CGAAGGAGAA CAACAACATC
TATATCACTG AGGAGGGGAG GAGAAGCCTA ACTAAGGCCT TGAGGGCCCA CAGGGTTATT
GAGTCTCTTC TAGTCAGGGT TGGGATTGAT CCAGAGACCG CCTGCAGTTA CTCGAAACAG
TTTGAACTAA AAGTTCCAGA CGAGATAATC GAGAAGCTCT ATGAATATCT CGGAAAACCT
AATAAATGCC CTCATGGGAA TGGAATCCCG TGA
 
Protein sequence
MDISEREIVY LSAIREMNDK GQPGKLSIIA KQIEVSPASA FEELKHLEKK GLISKENNNI 
YITEEGRRSL TKALRAHRVI ESLLVRVGID PETACSYSKQ FELKVPDEII EKLYEYLGKP
NKCPHGNGIP