| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2049 |
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| Symbol | |
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| ID | 5105271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1971082 |
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| End bp | 1972413 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507939 |
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| Product | replication factor C large subunit |
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| Protein accession | YP_001192113 |
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| Protein GI | 146304797 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC CCTGGGTGGT TAAGTACAGA CCAAAGACCC TAGATGACGT GGAGAATCAG
GAGGACGTAA AGGACGAGTT GAGGTCTTGG ATAGATTCTT GGCTTAAGGG ATCTCCCTCC
TCCACGGCAG TAATGTTATA TGGTCCTCCT GGGACCGGGA AAACCTCCTT GGCTATAGCG
TTGGCCAATA CCTACAAACT TGAGCTCGTG GAGACCAATG CCAGCGATAC CAGAAACTTG
ACCTCACTTA GGGCAATAGT GGAGCGGGCT TCAATTAGTG GTTCTCTCTT TGGAATTAGG
GGAAAGCTAA TCTTTCTCGA TGAAGTGGAT GGAATTCAAC CAAAGCAAGA CTACGGAGCA
GTATCAGCAA TTCTAGAGAT AATTAAGAAC ACGAAGTATC CCATATTGAT GGCTGCTAAC
GATCCATGGA ATCCGAATCT ACGTGATCTT AGAAATGCGG TGAAGATGAT TGAGGTAAAA
AAACTTGGGA AGATCGCTAT GAGGAGATTA CTCAAAAAAA TCTGCTCTGG CGAGAAAATT
AAGTGCGAGG ATAACGCGTT GGATCAGATC ATAGAGGCCT CAGACGGCGA CTCTAGATAC
GCAATAAATT TCCTTCAATC CATTGCTGAG GGATATGGAG AGGTCACGGA AAAGCTGGTA
AGTGAGCTAG TAAGAAGAAA GGAGAGGGAG CTAGATCCCT TTGAGACTGT CAGGAGCGTG
TTTTGGGCAA GATATGGTTG GCAGGCCAAG CAGGCAGTGT CTAACTCCCA GGTCGAATAT
GATCTTCTAA TGAGATGGTT ATCCGAGAAC ATACCGATTC AGTATGAAAT GTTAAATGAT
ATATGGAGAG GTTACGACGC CCTAGCTAGG GCATCTATCT TCCTCACAAG GGCCAAGCTT
TCCAGCTGGG ATATGCTAAG TTACACCTTT GACCTTATGG GTCCAGGTGT TGCAATGGCC
GAAGTGGAGA AGAAGAGTCC CTCGTGGAAA GCGAAGTGGA AGAAGTACCA ATTCCCTACC
CTAGTACAGC AATTGTACAA ATCTAAGAGG ACTAGGGATA CTAGGGATCA GATAATCAAG
AAGATAGGAT TCCACCTACA TTCCTCTTCG ACTAAAATTT ACAACGACGT GTTCCCGTTC
TTCCTTATCA TGACATCAAA GGACTTGGAT GAGCTGGCGA AGAACCTAGA TCTTAGTCCA
GAGGAGATTG AGTTCATTCA GTCCTCACAG GTAAGGGATG TGGCCTTGAA GGAAACTGGA
TCTACTGCAC AGCCCTCTGA GAGAACTTCT AGGTCTAGAA CGACCTCTAA ATCCAGGTCT
AAGAAACCTT GA
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| Protein sequence | MTVPWVVKYR PKTLDDVENQ EDVKDELRSW IDSWLKGSPS STAVMLYGPP GTGKTSLAIA
LANTYKLELV ETNASDTRNL TSLRAIVERA SISGSLFGIR GKLIFLDEVD GIQPKQDYGA
VSAILEIIKN TKYPILMAAN DPWNPNLRDL RNAVKMIEVK KLGKIAMRRL LKKICSGEKI
KCEDNALDQI IEASDGDSRY AINFLQSIAE GYGEVTEKLV SELVRRKERE LDPFETVRSV
FWARYGWQAK QAVSNSQVEY DLLMRWLSEN IPIQYEMLND IWRGYDALAR ASIFLTRAKL
SSWDMLSYTF DLMGPGVAMA EVEKKSPSWK AKWKKYQFPT LVQQLYKSKR TRDTRDQIIK
KIGFHLHSSS TKIYNDVFPF FLIMTSKDLD ELAKNLDLSP EEIEFIQSSQ VRDVALKETG
STAQPSERTS RSRTTSKSRS KKP
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