Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2035 |
Symbol | |
ID | 5105257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1961864 |
End bp | 1962223 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640507925 |
Product | hypothetical protein |
Protein accession | YP_001192099 |
Protein GI | 146304783 |
COG category | [R] General function prediction only |
COG ID | [COG1645] Uncharacterized Zn-finger containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCGG AACAGAGCGT AAAGAAAGCA GCAGAGCTCC TTAGGCAAGG GGCTACCATG TTAAGCGAGG CCTGCCCCGT GTGCAATAGC CCTTTGTACA GATTAAAGAG TGGGGAGATA GTGTGCCCTA TTCACGGTAG GGTAATAATA GCGAAGGATG AAGAAGAGGA GAAGAAGCTA AAACGTGGAA TTACGCTCGA CTACATGGAA CAGGTTCTAG TTGACTCTAT GTCTATTATT GTGGAAAAGC TGAAGTCTGA TCCCATGAAC TCCGAGGTGA TTGTCCAGGT AATTAGGTAC CTTGACTCCC TCGAGAGGTT GAAGAGGATA AGAGACCTTG GACAAGCTCA AGAGAAATAG
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Protein sequence | MSSEQSVKKA AELLRQGATM LSEACPVCNS PLYRLKSGEI VCPIHGRVII AKDEEEEKKL KRGITLDYME QVLVDSMSII VEKLKSDPMN SEVIVQVIRY LDSLERLKRI RDLGQAQEK
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