Gene Msed_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2035 
Symbol 
ID5105257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1961864 
End bp1962223 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content46% 
IMG OID640507925 
Producthypothetical protein 
Protein accessionYP_001192099 
Protein GI146304783 
COG category[R] General function prediction only 
COG ID[COG1645] Uncharacterized Zn-finger containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGG AACAGAGCGT AAAGAAAGCA GCAGAGCTCC TTAGGCAAGG GGCTACCATG 
TTAAGCGAGG CCTGCCCCGT GTGCAATAGC CCTTTGTACA GATTAAAGAG TGGGGAGATA
GTGTGCCCTA TTCACGGTAG GGTAATAATA GCGAAGGATG AAGAAGAGGA GAAGAAGCTA
AAACGTGGAA TTACGCTCGA CTACATGGAA CAGGTTCTAG TTGACTCTAT GTCTATTATT
GTGGAAAAGC TGAAGTCTGA TCCCATGAAC TCCGAGGTGA TTGTCCAGGT AATTAGGTAC
CTTGACTCCC TCGAGAGGTT GAAGAGGATA AGAGACCTTG GACAAGCTCA AGAGAAATAG
 
Protein sequence
MSSEQSVKKA AELLRQGATM LSEACPVCNS PLYRLKSGEI VCPIHGRVII AKDEEEEKKL 
KRGITLDYME QVLVDSMSII VEKLKSDPMN SEVIVQVIRY LDSLERLKRI RDLGQAQEK