Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2001 |
Symbol | |
ID | 5103388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1934665 |
End bp | 1935444 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507889 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_001192065 |
Protein GI | 146304749 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG AAACAATAGA AACTAAAAAA GAAGGAAACT TGTTCTGGAT TACGTTAAAT AGACCCGATA AACTAAACGC ACTAAACGCT AAATTACTTG AGGAGTTAGA TAGGGCAGTC TCTCAGGCAG AGTCTGACCC AGAGATTAGG GTTATCATCA TTACAGGGAA AGGAAAGGCC TTCTGCGCAG GGGCTGACAT AACCCAGTTT AACCAGTTAA CCCCAGCAGA AGCCTGGAAA TTCTCTAAGA AAGGAAGAGA GATCATGGAC AAGATAGAGG CACTGAGCAA ACCCACCATT GCCATGATCA ATGGATATGC CCTTGGGGGT GGACTAGAGC TAGCCTTAGC CTGTGATATA AGGATCGCAG CGGAGGAGGC CCAACTAGGC CTTCCAGAGA TAAACCTAGG GATATATCCG GGGTATGGGG GGACTCAGAG GTTAACCAGA GTTATAGGAA AGGGAAGAGC CCTGGAGATG ATGATGACGG GCGATCGTAT TCCTGGTAAG GATGCTGAGA AATATGGTCT CGTGAATAGG GTTGTCCCCC TAGCTAACTT GGAGCAAGAG ACAAGGAAGC TGGCAGAAAA GATAGCCAAG AAGTCTCCTA TCTCTCTCGC CTTAATCAAG GAAGTTGTAA ACAGGGGACT AGACTCTCCC CTACTGTCAG GTCTAGCGTT GGAAAGCGTA GGATGGGGAG TCGTGTTTTC TACGGAGGAC AAGAAGGAGG GGGTAAGTGC CTTCCTGGAG AAGAGAGAGC CTACGTTTAA GGGAAAATAG
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Protein sequence | MEFETIETKK EGNLFWITLN RPDKLNALNA KLLEELDRAV SQAESDPEIR VIIITGKGKA FCAGADITQF NQLTPAEAWK FSKKGREIMD KIEALSKPTI AMINGYALGG GLELALACDI RIAAEEAQLG LPEINLGIYP GYGGTQRLTR VIGKGRALEM MMTGDRIPGK DAEKYGLVNR VVPLANLEQE TRKLAEKIAK KSPISLALIK EVVNRGLDSP LLSGLALESV GWGVVFSTED KKEGVSAFLE KREPTFKGK
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