| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1971 |
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| Symbol | |
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| ID | 5103358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1907040 |
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| End bp | 1908389 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507859 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001192035 |
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| Protein GI | 146304719 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG ATGTAATAGT AATAGGCGGA GGAGTGGCAG GTGTATCTGC TGCTCTAAGG
GCTTCAGAAC TCGGCAAGTC AGTGGCTTTA GTTGAGAGGG ATCAGGTGGG AGGGGAATGC
ATAAATAGGG CATGCATACC ATCTAAAACC CTCATCGACG CAGTGAAAAC GGTAAACAGG
GTCTCCTCCT CTCCGTGGAT AGTGTCCTCG GCAACCTTGG ACTATGCTAA ACTCAACGAG
AACAAGGCAA GGATAATAAC TGCAATTAAG GATAGAATGG AGCACAACCT TAACGCCAGG
AATGTGAAGG TGATCAAGGG CAACGCCAAG ATAAAGGCCC AGGGAGAGGT GGAGGTAGAC
GGAAGGACTA TAACAGGTGA CCATCTTGTT TTGTCTACGG GGTCGGTTCC TCTTTCCTTA
CCCGATTTTC CCCTCAATGG GAGGAACGTT TTGGATCCAT GGACTGCTAT GAACTTGAAG
GAGATAAAGA ACAGGATAGT GATCGTAGGT GGAGGGGTTG CAGGGGTTGA GCTTGCGACC
TTGTTCAGGG CCCTGAACAA GGAGGTAACA ATCCTAGAGT TGATGCCCCA GTTACTCCCT
GGATTTGATA GGGATCTGGC CTCAGCTACT AAGAAGAGGT TAGAGGAAAA GGGTATCAGG
ATATACCTCA ACGCCAAGTC GAAGATTGTG AACTCTGAGG GTACAGTGAA GTTCTCCGTT
AACTTGCCCA ATGCCTCTGA GGAGGTGGAG GGTGACCTAG CAGTTGTCAC CATAGGAAGG
AAAGCCAGCA CTGAGAACCT GAACCTGAAG GAGATTGGCG TTGAGACGGA TCAGAGGGGG
TACGTGAAGG TTGATGAAAG GGGAAGGACC ACCAATCCCA AGGTCTTTGC TGCAGGTGAC
GTGGCTGGTG TTCCCCTATC CGCTACTAAG GCCTGGAGGC AGGGAATTGT TGCGGGGGAT
AACATAGGAG GGAAGGAAAG CAAGATGCCG AAGTATATCC CGTCTTCAAT TTTCGCAGAC
ATGGAAATAG GAACAGTGGG AAAGACCCTC GACGACCTGA AGAAGGCGGG AATAGAGGCC
AGGGAAATAA TGGTCGAGAT GAGAGACATA CCTAGGGCCT GGACCCTCAA TGAGACCGAT
GGGTTCCTTA AGCTGGTAGT TGCAGGAAAC AAGATTGAGG GAGCGCACAT GATAGGAGAG
GGAGCTACTG AGGTCATCAA CACTATGGCG TTGGCCATGG AACTTGGGAT CACCACCACC
CAATTGTACT CGGTTACCTT CTCCCATCCC ACTGTGAGCG AAGTGATTGG CGAAGCAATA
CAGAGACTAA CTCATGGAGA GATATATTAA
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| Protein sequence | MDFDVIVIGG GVAGVSAALR ASELGKSVAL VERDQVGGEC INRACIPSKT LIDAVKTVNR
VSSSPWIVSS ATLDYAKLNE NKARIITAIK DRMEHNLNAR NVKVIKGNAK IKAQGEVEVD
GRTITGDHLV LSTGSVPLSL PDFPLNGRNV LDPWTAMNLK EIKNRIVIVG GGVAGVELAT
LFRALNKEVT ILELMPQLLP GFDRDLASAT KKRLEEKGIR IYLNAKSKIV NSEGTVKFSV
NLPNASEEVE GDLAVVTIGR KASTENLNLK EIGVETDQRG YVKVDERGRT TNPKVFAAGD
VAGVPLSATK AWRQGIVAGD NIGGKESKMP KYIPSSIFAD MEIGTVGKTL DDLKKAGIEA
REIMVEMRDI PRAWTLNETD GFLKLVVAGN KIEGAHMIGE GATEVINTMA LAMELGITTT
QLYSVTFSHP TVSEVIGEAI QRLTHGEIY
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