Gene Msed_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1970 
Symbol 
ID5103357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1906684 
End bp1907013 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content43% 
IMG OID640507858 
Productregulatory protein, ArsR 
Protein accessionYP_001192034 
Protein GI146304718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACG ATAGAGAGAG GAGACAGGTA AAGAAGCTTT TCATCTTTCT ATTTTTAGCG 
TCAAGGGGAG GTAATACTAG GATTAGGATT GTCAATGCGC TCCTCAAGTC TCCCCTAAAC
GCAAACCAGC TGAGCAATCT CCTCTCTCTA GATTACAAGA CGGTCCAGCA TCACTTGGAC
GTTCTCATGG AGAACATGAT CATAACCAGA GAGGGTTCAG GTTACGGTGC ACTATATAAA
CCAAGTAAGT CGTTCATGAT GTACATAGAC GTCTTCAACG AGCTAATTTC CGATATAAAG
ATGCCTAAGA CTACTAGGAA ACAACCCTAA
 
Protein sequence
MGDDRERRQV KKLFIFLFLA SRGGNTRIRI VNALLKSPLN ANQLSNLLSL DYKTVQHHLD 
VLMENMIITR EGSGYGALYK PSKSFMMYID VFNELISDIK MPKTTRKQP