| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1940 |
|---|
| Symbol | leuS |
|---|
| ID | 5103327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1883466 |
|---|
| End bp | 1886282 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640507828 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001192004 |
|---|
| Protein GI | 162149625 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00395] leucyl-tRNA synthetase, archaeal and cytosolic family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATGAAA TCTCAAAGAA ATGGCAAGAG GAGTGGAGCA AGAACAGGAT ATTTGAGGCT
GATCCCAAGG ATCAGAAGAA GTTCTTCACC ACTGTCGCGT TTCCCTATCC TAACTCTCCA
TTTCACCTGG GACACGGTAG AACATACGTA ACGGGTGACG TTTACGCTAG ATTCATGAGG
ATGAAGGGAT ATAACGTCCT CTTCCCAATG GGCTTTCACT TTACTGGTAC CCCGATCATA
ACCATGGCAG ATGACGTGGC GAAGGGTGAT AAGGACCTAC TCGACATATT TCAGAACATT
TACGAGATAC CAGCTGACGT TATACCCAAG TTGTCCGACC CGCTCTTCAT GGCGAATTAC
TTTAAGGAAG ATATCAAGGC AGCCATGAGG GAAATAGGTT TATCCATAGA TTGGAGGAGG
GAGTTCACCA CAATAGACCC ACAATTCTCA GCTTTCATAG TGTGGCAATT CTCCAAGCTA
CAGAAGAAAG GTTACGTGGT AAAGGATACC CATCCCGTGG GTTGGTGTCC CGTTCACAAC
CTCCCCGTTG GAATGCATGA TACCAAGGGA GACATGGAAC CTGAGATTGG AGAGTACGTT
GTGATATTCT TCGAGAGTAA GATGGGAGCA CTTGCCGCTG CGACCCTAAG GCCTGAAACC
ATTTTTGGGG CAGTAGCAGT TTGGGTAAAC CCTAAGGCAA CGTACACGGT TGCGGAGATT
TGGGGTAAGA AGGTAATAGT CTCGGAGAAG GCCGCCGAGA AGTTGAAGTT CCAGACTGAC
GTGAAGGTGC TCGAAAAGGT CAGCGGATCG GACCTTCTGA AGATCGTGGC GATAAACCCC
ATTACGGGGA AGGAGATTCC AATCCTTCCT GCAGATTTCG TGGACCCCAC AACTGCCACG
GGCGTCGTTA TGAGTGTTCC AGCACATGCT CCCTTTGACT ACTTCTACCT GAAGAAGGCC
AAGGTTGGCA TAGAACCCAT ACCCGTGGTC GCAGTTGAGG GACAGGGAGA TGCTCCAGCA
AAGGATCTAG TTGAGTCGTC CCATCCCAAG AACGACGCTG ATCTCAAGAA GCTCACTGAA
CAGCTGTACA GGTTGGAGTT TAACAAGGGG CTTATGAGGA GCGACATACT CAGGTTAGTG
AAAGACGAGC TCAGGGCTGA GCTTTCAGTG GTAGCGGGAA AACAGGTACC TGAGGCCAGG
AAGATGGTCA CGGATATCTT GATTCAGAGG AAGGCTGGCA CGAAGATGCT GGAGATAATG
AACAAGCCCG TGTACTGCAG GTGCGGTAAC GAAGTGGTTG TTAAGATTCT TCAGGACCAG
TGGTTCTTGG ATTACGGCAA CCCCGAGTGG AAGGCTAAGG CTAAAAAGCT CTTGGACAGC
ATGAGGGTAA TCCCCGAGGA GACCAGGAAG GACTTCGAAT ACGCCCTCGA TTGGTTGCAA
AAGAGAGCCT GTGCAAGGAC AAGGGGACTA GGTACCCCTC TCCCCTGGGA CAAGAAATGG
ATCATCGAGA GCCTATCCGA TTCCACTATC TACATGGCTT ACTATACCCT CTCCCACAAG
ATAAAGGAGT TCGGACTTCA TCCCTCTCAA CTCACTGAGG AGACCTGGGA TTACATAATG
CTGGGAGAAG GCGACGTCAA GGCCATATCG GAGAGAAACA AGATAGGAGT AGATGCCTTA
CAAGAGTTGA GGAGACACTT CACCTACTGG TATCCGCTTG ATCTAAGGCA TAGCGGTCCT
GATCTGATCC CCAACCACCT GAGCTTCTTC ATATTCAATC ACGCTGGGAT ATTTCCTGAA
AACCTCTGGC CAAGGGGCGT TGCCGTAAAC GGCTTCATCC TCTACGAGGG GAAGAAGATG
AGCAAGTCCC TGAGGAACAT AGTTCCGCTG AGGAAGGCCA TAAGAACGTA TGGAGCAGAC
GTGATAAGGA TAGCCCTTTC CTCTCTGGTT GATATGAGCT CTGACGCTAA CTTCACCGAG
GCAGGGGCCA GGGCAATCGC AGACAACCTG AAGAGGTTTT ACGAACTGAT GCAGATGCAG
GATGGCTCCA CGATTGATGG AACTCCTGAG AAGTGGCTGA GATCGAAGTT ACACAGGCTA
GTAAGAGACG TCACTCCGCT CATGGAGTCC ATGAGGTTCA GGGAGGTGAT AAACGAGCTG
CTCTTCAACC TATCATCTTA CATCAACGAA TACCTAGAAA TGGTGAGGTC GGAGTCCAGG
GAGTACAATA GGGATGTGAT CAGGGAGGTT GTGGAGACCT GGACAAAGTT AATGGCCCCC
TTCGCCCCTC ACCTTACCGA GGAGATGTGG CATCAACTGG GGCATAACAC CTTCCTGTCC
TTAGAGAGTT GGCCAACCCC AGACAATAGC AAGATCAATG ACCAGATAGA GTTGGAACAT
GAGTATCATA AGCTGTTAAT AGAGGACATA AGGGCAATAC TCAACGTGTA CAAGGGTAAG
CCTTCCTCCG TCCTATTATA CGTTCACGAC GGGAGTCTGA ATCAGGTCGT GAAGAGCGCT
CTGGACGTGC TGAACAGTGG AGGGACAATG AAGGACTTCA TGCAGAAGAA CACGCCAAAG
AGCAAGGAGG AGGCAAGGGT ACTTCAGAGG ATCATGCAAT ACGTGACGGA GATGCCGGAG
ACCGTGAAGA AACTAATCTA CTCTAACGTC AATGAAATGG AAGTAACGAG AAAGGGAGTG
CCACTTCTGA GGTATAAGCT GAACCTAGAG ATTGAGGTTT TGGCCTACAC TCAGGAAGTG
AAGCAGAAAT TAAACAAAGA CGCTTTGCCC TACAGGCCAG CAATACTCGT GAAGTAA
|
|---|
| Protein sequence | MNEISKKWQE EWSKNRIFEA DPKDQKKFFT TVAFPYPNSP FHLGHGRTYV TGDVYARFMR
MKGYNVLFPM GFHFTGTPII TMADDVAKGD KDLLDIFQNI YEIPADVIPK LSDPLFMANY
FKEDIKAAMR EIGLSIDWRR EFTTIDPQFS AFIVWQFSKL QKKGYVVKDT HPVGWCPVHN
LPVGMHDTKG DMEPEIGEYV VIFFESKMGA LAAATLRPET IFGAVAVWVN PKATYTVAEI
WGKKVIVSEK AAEKLKFQTD VKVLEKVSGS DLLKIVAINP ITGKEIPILP ADFVDPTTAT
GVVMSVPAHA PFDYFYLKKA KVGIEPIPVV AVEGQGDAPA KDLVESSHPK NDADLKKLTE
QLYRLEFNKG LMRSDILRLV KDELRAELSV VAGKQVPEAR KMVTDILIQR KAGTKMLEIM
NKPVYCRCGN EVVVKILQDQ WFLDYGNPEW KAKAKKLLDS MRVIPEETRK DFEYALDWLQ
KRACARTRGL GTPLPWDKKW IIESLSDSTI YMAYYTLSHK IKEFGLHPSQ LTEETWDYIM
LGEGDVKAIS ERNKIGVDAL QELRRHFTYW YPLDLRHSGP DLIPNHLSFF IFNHAGIFPE
NLWPRGVAVN GFILYEGKKM SKSLRNIVPL RKAIRTYGAD VIRIALSSLV DMSSDANFTE
AGARAIADNL KRFYELMQMQ DGSTIDGTPE KWLRSKLHRL VRDVTPLMES MRFREVINEL
LFNLSSYINE YLEMVRSESR EYNRDVIREV VETWTKLMAP FAPHLTEEMW HQLGHNTFLS
LESWPTPDNS KINDQIELEH EYHKLLIEDI RAILNVYKGK PSSVLLYVHD GSLNQVVKSA
LDVLNSGGTM KDFMQKNTPK SKEEARVLQR IMQYVTEMPE TVKKLIYSNV NEMEVTRKGV
PLLRYKLNLE IEVLAYTQEV KQKLNKDALP YRPAILVK
|
|---|
| |