| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1938 |
|---|
| Symbol | |
|---|
| ID | 5103325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1881916 |
|---|
| End bp | 1882863 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640507826 |
|---|
| Product | PP-loop domain-containing protein |
|---|
| Protein accession | YP_001192002 |
|---|
| Protein GI | 146304686 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR00269] conserved hypothetical protein TIGR00269 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCG ATAACTGTGG AGTAAGGGAG GCAGAGGTAT TCCAGCCCCA CACGGGGAAA
AGGCTTTGCA GGGATTGTTT CCTGTCTGAT GTGCAGGAGA GAGTAGCGAG GGAAGCAAAG
AAACTGGGAG TAACCTCGGT CTCAAGGGTT CTCATAGCTG TCTCAGGTGG AAAGGACAGC
CTTGTGCTGG CTGATACGCT ATCGAAGGTG ATGGACCCAA GTAAGTTAAT AGCCTTCAAC
ATAGTTGAGG GCATCCAGGG GTATAACAGG GAGGATCAGG TCAAGGAACT TTATCATTAC
TTGAGGGACC TAGGAATAGA GTTAATATCA ACCTCATTCA AGACCTCGGT TGGCTACTCC
CTTGATGAGA TGGTTAGCTC CTCAAGGGCT AGGGGGTTGA ACATAGCTGC CTGCACGTTC
TGTGGCGGGT TTAGGAGGAA ATTAATAAAT CAGGCTGGGA GGGATGTGAA GGCCGACCTT
GTGGCTACAG GCCACAACCT AGATGACGAG GCCCAGACTA TTATCATTAA CCTACTTCGC
GGAGATGTTA GGAAACTAAT GAGGGTTGGG GAAAGCCCCC TCAAGTTAAG CGATAAATTT
GTCATGAGGG TAAAACCCCT CAGGAAAATA TACGAATGGG AGACCACGAT GTACGCGTTC
TTGAAGGGTT TTAAGTTTCA GGAAGTGGAG TGCCCTTACA TCTCGGCGAG ACCTACCATG
AGAGCTAAGG TGAGGGACCT CATGTACGCC TTGGAGGAGA AATCACCGGG TTTCCTCCTC
AGGTTGGTGG AGAACTTCGA CAGAATTGGA GAAGAGGTAA GAAGGGAGAG CAAACTTACC
ACCCTTCCCA CATGTAAGAT GTGCGGTGAA CCAACGAGCT TCGGAAGAGA ATACTGTAAG
AACTGCGAAC TTCTCATCTC TGCGGGACTT AGACCAGTTA GCTCATGA
|
|---|
| Protein sequence | MKCDNCGVRE AEVFQPHTGK RLCRDCFLSD VQERVAREAK KLGVTSVSRV LIAVSGGKDS
LVLADTLSKV MDPSKLIAFN IVEGIQGYNR EDQVKELYHY LRDLGIELIS TSFKTSVGYS
LDEMVSSSRA RGLNIAACTF CGGFRRKLIN QAGRDVKADL VATGHNLDDE AQTIIINLLR
GDVRKLMRVG ESPLKLSDKF VMRVKPLRKI YEWETTMYAF LKGFKFQEVE CPYISARPTM
RAKVRDLMYA LEEKSPGFLL RLVENFDRIG EEVRRESKLT TLPTCKMCGE PTSFGREYCK
NCELLISAGL RPVSS
|
|---|
| |