Gene Msed_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1937 
Symbol 
ID5103324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1881638 
End bp1881919 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content48% 
IMG OID640507825 
Producthypothetical protein 
Protein accessionYP_001192001 
Protein GI146304685 
COG category[S] Function unknown 
COG ID[COG1888] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTATAA GAAGAATTGT CCTAGATGTC CTCAAACCCA TAAGGGGTTC GTCCATTGTG 
GATTTGGCCG AGAGACTGGA CAACTTGGAG GGAGTAGATG GAGTTAACAT AAGCGTTTCG
GACATGGACG TTGAAACCAT GGGGCTTATG GTAGTGGTCG AGGGCGAGGA TGTGGACTTT
AAGGAGGTTC AAAACATTCT AGAGGAGGAG GGCTGTGCAA TTCACAGTAT AGACGAGGTT
GCCAGTGGTA AAAGGCTTGT GGAAGGGAGA CGTGGTAAAT GA
 
Protein sequence
MTIRRIVLDV LKPIRGSSIV DLAERLDNLE GVDGVNISVS DMDVETMGLM VVVEGEDVDF 
KEVQNILEEE GCAIHSIDEV ASGKRLVEGR RGK