| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1918 |
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| Symbol | |
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| ID | 5103305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1865671 |
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| End bp | 1867071 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507806 |
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| Product | V-type ATP synthase subunit B |
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| Protein accession | YP_001191982 |
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| Protein GI | 146304666 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1156] Archaeal/vacuolar-type H+-ATPase subunit B |
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| TIGRFAM ID | [TIGR01041] ATP synthase archaeal, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0383296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCAT CCATGAATGT AAGGGAATAT TCGAACATTT CAATGATTAA GGGACCCCTT
CTGATGGTTC AGGGAGTGGC AGACTCAGCT TATAACGAAC TTGTAGAGGT CGAGATGCCC
AATGGGGAGA GAAGGAGAGG GATAGTTGTA GATAGCCAGA AGGGAATTTC CATAGTACAG
GTCTTTGAGG GAACCAGGGG AATATCGCCA GTAGGAACCA CCGTGAGGTT CCTAGGTAGA
GGATTAGAGG TTAAGATCTC TGAGGAAATG CTTGGCAGAA TTTTCAATCC CCTGGGAGAT
CCCCTTGACA ATGGTCCCAT GGTGATAAAG GGGGAGAAGA GGGACATCAA TGGCGAACCC
TTGAACCCTG CTATCAGGGA TTACCCAGAG GAGTTCATTC AGACTGGTAT ATCAGCAATA
GATGGTCTAA ATTCCCTTCT CAGGGGTCAG AAGCTTCCCA TCTTTAGCGG AAGCGGTTTA
CCCGCGAACA TACTTGCTGC ACAGATAGCT AAACAGGCCA CAGTGAGAGG AGAGGAGAGC
AACTTTGCCG TTGTATTCGG TGCCATCGGT GTAAGATATG ACGAGGCACT GTTCTTCAGG
AAGTTCTTTG AGGAAACCGG GGCAATCAAT AGGGTGGCCC TAATCATGAG TTTAGCTAAC
GAACCACCAG TGATGAAGAC ACTAACTCCC AAGACAGCAC TTACCCTCGC GGAATATTTG
GCCTTTGAGC AGGACATGCA CGTGTTGGCA ATCCTTATCG ATATGACAAA TTACTGTGAG
GCCCTTAGGG AGATCAGCGC ATCAAAGGAG GAAGTCCCCG GTAGAGGTGG TTACCCAGGT
TACATGTACA CTGACCTTGC CCAGACCTAC GAGAGAGCAG GAAAAGTGAT AGGAAAGAAG
GGTTCCATTA CTCAGATGCC CATTCTCACA ATGCCAAACG ACGACATTAC CCATCCAATT
CCAGACCTTA CAGGTTATAT CACGGAGGGG CAAATTACCT TAGACAGAAG CCTATACAAC
AAGGGTATCT ATCCACCAAT TAACGTCCTC ATGAGTTTGT CAAGGCTTGC CAAGGACGGA
ATAGGTGAGG GTAAGACCAG GGATGATCAC AAGGACTTAT CTAACCAGTT GTTTGCGGCC
TACGCAAAAG CAGTAGATAC TAGGGGATTA GCTGCAATCA TTGGAGAGGA TAGCCTATCT
GACACAGACA AGAAGTACCT AATGTTTGGG GATGCCTTTG AGAGGAAGTT CGTAAGTCAA
GGAGTGAACG AGAACAGGGA TATAGAGACG ACCCTAGATA TTGGGTGGGA GGTACTCTCC
ATTTTGCCAG AAAGGGAGCT CACGAATGTG AAGGTTGACT ACATCAAGAA GTATCATCCA
GCCTACCGTG GTAAGAAATG A
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| Protein sequence | MESSMNVREY SNISMIKGPL LMVQGVADSA YNELVEVEMP NGERRRGIVV DSQKGISIVQ
VFEGTRGISP VGTTVRFLGR GLEVKISEEM LGRIFNPLGD PLDNGPMVIK GEKRDINGEP
LNPAIRDYPE EFIQTGISAI DGLNSLLRGQ KLPIFSGSGL PANILAAQIA KQATVRGEES
NFAVVFGAIG VRYDEALFFR KFFEETGAIN RVALIMSLAN EPPVMKTLTP KTALTLAEYL
AFEQDMHVLA ILIDMTNYCE ALREISASKE EVPGRGGYPG YMYTDLAQTY ERAGKVIGKK
GSITQMPILT MPNDDITHPI PDLTGYITEG QITLDRSLYN KGIYPPINVL MSLSRLAKDG
IGEGKTRDDH KDLSNQLFAA YAKAVDTRGL AAIIGEDSLS DTDKKYLMFG DAFERKFVSQ
GVNENRDIET TLDIGWEVLS ILPERELTNV KVDYIKKYHP AYRGKK
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