| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1879 |
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| Symbol | |
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| ID | 5104147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1822060 |
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| End bp | 1822881 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507765 |
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| Product | transketolase subunit A |
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| Protein accession | YP_001191943 |
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| Protein GI | 146304627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG GTGGGCGTGA TGGAATTCCA ATATCAATAG AGGAATTAAA CAAGCTCAAG
GAGGTAGCTG ACAGAGCTAG AAAGAACGTA ATTAGAATGC AATTCTACGA CCAATCAATT
CACGTTGGTT CCTCCTTGAG CAGTATCGAG ATCCTAACGG CTCTCGAACT CAAGGTATTA
AGAGACTCAA ATGATCCAGT CAACAGGGAC TGGCTAATCC TAAGTAAGGG CCACGCGGCT
CCTGCTCTCT ATGCGGTTCT CCACGAGAAG GGACTAATCA AGGAAGAGGA ACTGTGGAAG
ATCCAGGACA TCTCTGGCCT TCTACAAGGC CATCCCGAGA CCTTCATACC CGGAGTTGAC
ATGTCAACTG GTAGCCTAGG GCAGGGACTT AGCTTCGGAA TTGGAGTTGC CACGGGAATA
AAGATGGCCA AGGGAACTGG AAGGGTATTC GTCATCATGG GAGACGGAGA ACAGGACGAG
GGCGAAGTGT GGGAGGCCAT GACCCACGCG GTCGCTCGCA ACTTGGACAA TCTGGTAGCT
ATCATAGAGA TGAACGGATT CCAGCTGGAC GAAAGTACGA AGAACGTTAA GCCCAAGGAA
TTCCTTCCTG AGGTATGGAG AGCCGTGGGT TGGAGAGTGT TTAACTGTGA TGGCCACGAC
ATAGCAAGCG TTATCTCCAC CGTGGATGAG GCACTAAAGA CAGGGAAACC CGCGGTCATA
TTCGCGGAAA CCAAGAGAGG TAAGGGGTTC ACCCCAATAG AAAACACAAA GAAGCAGAGG
ACTGTTCCAG ATGTTGCAAG GCAGTTTCTC CTCAATTCGT GA
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| Protein sequence | MEKGGRDGIP ISIEELNKLK EVADRARKNV IRMQFYDQSI HVGSSLSSIE ILTALELKVL
RDSNDPVNRD WLILSKGHAA PALYAVLHEK GLIKEEELWK IQDISGLLQG HPETFIPGVD
MSTGSLGQGL SFGIGVATGI KMAKGTGRVF VIMGDGEQDE GEVWEAMTHA VARNLDNLVA
IIEMNGFQLD ESTKNVKPKE FLPEVWRAVG WRVFNCDGHD IASVISTVDE ALKTGKPAVI
FAETKRGKGF TPIENTKKQR TVPDVARQFL LNS
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