| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1877 |
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| Symbol | |
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| ID | 5104145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1820118 |
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| End bp | 1821152 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507763 |
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| Product | chorismate mutase / prephenate dehydrogenase |
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| Protein accession | YP_001191941 |
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| Protein GI | 146304625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01791] chorismate mutase, archaeal type
[TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.786603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAC TCGACCAGCT AAGGGCTGAG ATCGACAGGG TTGATGAGGA GCTTTTTAAA
CTATTTTTTA AACGCCTTGA ACTTGTTTCT GAAATTGGTC ATCTTAAAAA GAAGGAAGGT
CTCCCTGTCA CCGACGAGAG GAGGGAGAGT GAGGTCAGGG AGAGATGGAG AAGCTTAGCT
AGAGCCTATG GAATTCCCGA AACCCTGGCG GATAACCTCC TCTCGACCAT GTTCTCTGTA
GCCAAGATGA GGGAGGTCAA TCCCTCGGAA AAGAGAAAAA TAACCCTCGT TGGTTACGGC
GGGATGGCTA GGTCGCTGGC CTCCCTGTTC AAGCTCGCAA AGCACGAGGT TGTGATAACG
GGAAGAAGCC AGGAGAAGTC CCAGAAGCTC GCGATAGATT TCAACTTCAC CTACATGCCC
ATGCCACAAG CCCTTCAATG GGGCGAGATC GTGATTTTGG CCCTTCCACC TGAGGGTGTG
TTCTCGGAGA ACGTCACCAG GTTTCTCCAC CTGTCCAAGG ACAGGGTGGT AATGGATATC
CTCTCGAGCA AGACCAGATT CTTTGGGAAA CTCGAGGAAA TGTCCAGGCA GATGGGATTC
AGGTTCGTGT CGACACACCC GCTCTTTGGT CCCTACCTGA ACCCTGTGGG AGAGAAGATA
GTCCTGATCC CCTCTGAAAC CACGGGAGAC CTCGAGGAGA TATCGGAGTT CTGGAGGGGG
GTAGGACTGA CCCCCCTAAT CACAGACGTA GATACACACG AGAAGTTAAT GGCCGTGGTT
CAGGTTTTAC CCCACTTTTT CATCCTGGGC CTTTCCAGTA GCTTGGACCT CCTCTCCAGG
GAGCTCAACG TCGACTTCTC CCAGTTTCAG ACAACCAACT TCAGGGAGAT ATACAAGATT
GTGAGGAGGG TAAAGGAGTT GGAGCCAGTC ATACTGGAGA TACAGAGAAT GAACCCCTAC
GCGGAGCAGG CGAGAAGGCT TGGACTTAGA GAGTTAAATA CTCTTTTCTC TACTCTTCAA
GAGGAAAAGA AATGA
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| Protein sequence | MKELDQLRAE IDRVDEELFK LFFKRLELVS EIGHLKKKEG LPVTDERRES EVRERWRSLA
RAYGIPETLA DNLLSTMFSV AKMREVNPSE KRKITLVGYG GMARSLASLF KLAKHEVVIT
GRSQEKSQKL AIDFNFTYMP MPQALQWGEI VILALPPEGV FSENVTRFLH LSKDRVVMDI
LSSKTRFFGK LEEMSRQMGF RFVSTHPLFG PYLNPVGEKI VLIPSETTGD LEEISEFWRG
VGLTPLITDV DTHEKLMAVV QVLPHFFILG LSSSLDLLSR ELNVDFSQFQ TTNFREIYKI
VRRVKELEPV ILEIQRMNPY AEQARRLGLR ELNTLFSTLQ EEKK
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