| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1863 |
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| Symbol | |
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| ID | 5104131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1808152 |
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| End bp | 1808727 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507749 |
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| Product | exosome complex RNA-binding protein Csl4 |
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| Protein accession | YP_001191927 |
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| Protein GI | 146304611 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1096] Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.824984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAAAC AGGGCGATTT AACGCTTCCT GGGGACGTTC TCTCCGTGAT CGAGGAGTTC
ACTCCAGGTG AGGGTTGTTA CGAACTTCAG GGTCAGGTCA GAGCATCAAT CATTGGGAAA
GTCTTCTACG ACATGATCAA CAGGAAAAGC AACGTGATCC CTGAGAAGAA GACCTTTGTA
TACAAGCTCA AGAAGGCCAA GTACATGTAC GGCCTCGTCA CCAGCCTGAA GGAAGATTAC
GCGGTTGTGG CAGTGAGTAG TGTAGAGGAG AGGTTCGTGA GCCCGTCAAT AACGGGTTAC
CTCCACATCT CGCAGGTCTC CCACAAACAC GTTAAGTCCC TACGAGACGC AGTGAGGCCA
TCTGACGTGA TAAAGGCCAG GCCAATCTCC TACACCTACC CCCTTCAGCT CTCGCTCAGG
GGAAAGGACC TCGGAGTGAT AGTTGCGTCC TGCTCCATTT GCGGGACCGT AATGCTCAAG
ATGGACGAAG AACATTTAAA GTGCCCGAAC TGTGGTAACG TTGAGACCAG AAGAGTTGGA
CCTTACTCGG TGAAGGGAAA TGGAAATCGC AGTTGA
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| Protein sequence | MGKQGDLTLP GDVLSVIEEF TPGEGCYELQ GQVRASIIGK VFYDMINRKS NVIPEKKTFV
YKLKKAKYMY GLVTSLKEDY AVVAVSSVEE RFVSPSITGY LHISQVSHKH VKSLRDAVRP
SDVIKARPIS YTYPLQLSLR GKDLGVIVAS CSICGTVMLK MDEEHLKCPN CGNVETRRVG
PYSVKGNGNR S
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