| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1835 |
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| Symbol | |
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| ID | 5104185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1779949 |
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| End bp | 1781346 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640507729 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001191908 |
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| Protein GI | 146304592 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.963545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATATC AGTTTAAGAT CATGAATCCA TTAACTGGTT CATTGAAGTT TCTAGCGACT
ACACTTCTAA ACTCAATCAC CGCTCTACTG TTCTTTCTCA TTGTCGCCCA TTTTTCTAGT
CCGTCATTTG TTGGGAAGGT AGCAATAATA CAGCTTATAG AGACTATTAC AGGATCGTTC
TTTGCTTTAC TACCGTTCAA TCTTGTCACG AGGGATATCT CACATAAATA TGCCTCCTCT
CAGGACCATA GGAAGGTAGT TTCTACTTCA CTCTCGTACT CCCTTTTGGT TTCACCTTTT
CTCCTTTTTC TGTTTCTATT TCCCTCATAC GTATGGTTGT CAATACCGTA CTTTGTTTTA
TATTTATTTT CCACTTATCA ATATCAGATT TTATCGGGAT TGGGAAAGTT CTCTGAAACG
AATTTAGGCA ACGTTATCTT TACCGTAACG AGATGGGGGA TATCCTCGGT CGCAGTGTTT
TATCACAGCA TATCACTCTT GATCCTAATT TGGACTTTAG GTGCCCTGGT AAGGGTTATC
TACTATAACC ACTATCTTCC GTTTAAATTT CACTTCGATT TTCAGGTTGC AAAGGAAATA
GCCAAGATAG GGGTTCCAAT TTATTTGTCA GGAATAGTGT CTTTTATTTC CGGACAAGGG
GATAGAGTTG TTACAGCATT TTTACTGGGA TCGTATAGTC TAGGTATTTA TCAATTGGTA
GCATTGATTT CTGTTGTACC AAATACGCTG ATTTGGTCCT TGACCTCTGC CCTACTACCT
TCCTCTACCT ACTATTACAC TAAGGGCGTC GAGATGAGGG AGATGGCCTC CGGTGCCTTT
AGACTCTTGA CCTTCCTCTC CCTTCTTCTA GGGGTATCTA GTTACGCAAT TGCCCCATAT
CTAGTTCTCA AGCTTTTCCC TGAGTATTCA CCTGGAGTCG AGGTGTTGAA GATCCTAGTT
CTATTCATTA CAGTTACAAT GCCCTTTCAA ATTCTCTCAA CGTTCTTGAT TGCACTCAAC
AAGAATTACA GACCCTTCCT GGTAATTGGG AGCGCGAGCG CCATTGAAGT GGTTCTGGTC
TCCTTCCTCC TGATCCCGCG AATGGGGATT TTGGGTGCGG GGATAGCCCA GGCTGGGAAT
GCCATAGTAA CCAGTATTCT TTATGTAATT TTCTCCCTAA AACAGGGAAT AATAACACTC
GATAGAAAGA CTATATATTC CATTTTGTTG ATATCTCTTT CTTCGATTTC CCTCTTCTCC
TGGGTGATTG GGGCACTTGT GATTATTCTA GGATTGAAGT TTCTTGGAAT CATAACTAAT
AAGGAGATGG CCTTAATACA AAAATTCATT CCACCTCAGC TCAGATTCTT TATAAGGATA
CTTAATCTCT TCATTTAA
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| Protein sequence | MIYQFKIMNP LTGSLKFLAT TLLNSITALL FFLIVAHFSS PSFVGKVAII QLIETITGSF
FALLPFNLVT RDISHKYASS QDHRKVVSTS LSYSLLVSPF LLFLFLFPSY VWLSIPYFVL
YLFSTYQYQI LSGLGKFSET NLGNVIFTVT RWGISSVAVF YHSISLLILI WTLGALVRVI
YYNHYLPFKF HFDFQVAKEI AKIGVPIYLS GIVSFISGQG DRVVTAFLLG SYSLGIYQLV
ALISVVPNTL IWSLTSALLP SSTYYYTKGV EMREMASGAF RLLTFLSLLL GVSSYAIAPY
LVLKLFPEYS PGVEVLKILV LFITVTMPFQ ILSTFLIALN KNYRPFLVIG SASAIEVVLV
SFLLIPRMGI LGAGIAQAGN AIVTSILYVI FSLKQGIITL DRKTIYSILL ISLSSISLFS
WVIGALVIIL GLKFLGIITN KEMALIQKFI PPQLRFFIRI LNLFI
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