| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1809 |
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| Symbol | |
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| ID | 5105372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1751425 |
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| End bp | 1752333 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507708 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001191887 |
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| Protein GI | 146304571 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATC TAGTAATAGG CGGAGCCGGT TTCCTGGGCT CCCATCTGAT TGAGTCCCTT
AGTGGGGATA TAACGGTTGT TGACGACCTC TCCACCGCGA AATACTTTCA AGGGAACGCG
AAACTTATCA GGGAGAAAAT AGAGAACTTC TCCACAGACG AGAAATATGA TTATGTTATA
CACTTGGCTG CTAGGCCCTC CCCGGAGGAT TACATCAACC ATCCGGTTGA GACTGCCTTG
TCCAACTCCG TGGGAACTTA CAAAGCCCTC GAAATAGCCA GGAGAAGCGA CGCCGTATTT
CTCTATACCT CCTCCTCCGA AATTTACGGT CACGCAGAGG TAATTCCAAC ACCTGAGAGC
TACTGGGGTA AGGTAAATCC GACCGGGGTC AGGAGCTGTT ACGACGAGAG TAAGAGGTTC
TCCGAGGCCC TAATCATGTC CTTTTACAGG GAGTATGGAC TAGACGTGAG GATACAGAGG
CCCTTCAACG TGTATGGACC TAGGCTCAGG GAGGATGGCT CGTATGGAAG GGTGATCTCG
AGGTTCGTGT ATCAGGCATT GAGGGGTGAG GACTTGACGA TATTTGGGGA TGGGAATCAG
ACGAGGGCTT TCCTTTACGT GAGCGACTGG GTTGAGGCAA CCAAGAGGAT GCTGGGCCCA
GGGCTCAAGG GAGTTATCCT GAATGTGGGA TCTGACAAGG AAACGAAAAT AATTGACCTA
GCGAAAACAA TAATATCCAT GACTGGAAGC AAGTCCGGTC TCAAGTTCCT ACCTCCAAGG
CAGGACGATC CTCCAAGGAG AGCAGCAGAC ATAACCAAGG CTAAGGAGGT CCTGGGCTGG
GAGCCTAAGG TTTCCTTGTT CGAGGGATTG AAGATGACTA TAGAGTGGTT CAGGGGTGTA
CTCAGTTGA
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| Protein sequence | MKYLVIGGAG FLGSHLIESL SGDITVVDDL STAKYFQGNA KLIREKIENF STDEKYDYVI
HLAARPSPED YINHPVETAL SNSVGTYKAL EIARRSDAVF LYTSSSEIYG HAEVIPTPES
YWGKVNPTGV RSCYDESKRF SEALIMSFYR EYGLDVRIQR PFNVYGPRLR EDGSYGRVIS
RFVYQALRGE DLTIFGDGNQ TRAFLYVSDW VEATKRMLGP GLKGVILNVG SDKETKIIDL
AKTIISMTGS KSGLKFLPPR QDDPPRRAAD ITKAKEVLGW EPKVSLFEGL KMTIEWFRGV
LS
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