| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1792 |
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| Symbol | |
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| ID | 5105356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1732262 |
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| End bp | 1732996 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507691 |
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| Product | proliferating cell nuclear antigen |
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| Protein accession | YP_001191871 |
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| Protein GI | 146304555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA AGGTTATTGA CGCTAACTCG ATGGCCACGA TCTTCAGGAC CATAGGCGAG
TTCATGCCCG AGATTACCTT GATAGGAACC AAGGAAGGCG TCAGGCTCAG CGGTGTTGAT
CCAGCCAGGG TTGCACTCAT AGATATCTTT ATTCCGCAGG CCTATTTCCA CGAGTATGAG
AGCGCGGAGA AGGAGACCGT TACTGTTAAG CTTGAGGAAA TAATAGCTTC CCTCAAGAAC
GTTAAGAAGA ACGATAGCTT AACTTTCCAG TCAGGGGAGG ACAGGCTCAT GATAACCTTG
GACGGTGACT TTGAGAGGAC CTTTTACCTA CCCATCCTCA TGGGTGAGGA GCCGAGTCTA
CCATCGATCA AGCTGGAGTT CGCCTTTAAG GCCAAGATGC TCACCTCGAC CTTCTCCAAC
GTCATGCAGA TACTTGGAGA CCTAGGCGAT GCCCTAACCC TGTCCGCAGA GGGAGGAAAG
CTCACGTTCA TGGTTGAGGG CGATGTGGGC AGTTCCAAGG TGGAGTTGTC TGAGGAGTCT
GGGACCCTGC TTGAGGCCAC CGGTGCAGAC GCGAAGGGGA CTTACGGCAT GGATTACCTG
GTGAAGACCG CGAAGATGAG GAACTCTTCT GACATAGTGG AGCTCATGTT CGGTTCCCAA
CTACCCATAA AGTTGAGGTT TGAGTTACCT CAGGAGGGTT ACGGTGACTT CTATATTGCC
CCCAGGGCAG AATAG
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| Protein sequence | MKFKVIDANS MATIFRTIGE FMPEITLIGT KEGVRLSGVD PARVALIDIF IPQAYFHEYE
SAEKETVTVK LEEIIASLKN VKKNDSLTFQ SGEDRLMITL DGDFERTFYL PILMGEEPSL
PSIKLEFAFK AKMLTSTFSN VMQILGDLGD ALTLSAEGGK LTFMVEGDVG SSKVELSEES
GTLLEATGAD AKGTYGMDYL VKTAKMRNSS DIVELMFGSQ LPIKLRFELP QEGYGDFYIA
PRAE
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