| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1766 |
|---|
| Symbol | |
|---|
| ID | 5104171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1701971 |
|---|
| End bp | 1702333 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640507662 |
|---|
| Product | PaREP1 domain-containing protein |
|---|
| Protein accession | YP_001191845 |
|---|
| Protein GI | 146304529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTC AAACTGCTGC CGACGTGTAT CTGGAGGAAG CTGATGGACT CCTGGAGAAG
GGAGACGTGG TTCAAGCTAG CGAGAAGTAC TATAAGGCTG CGGAGGAGGC GGTTAAGCTT
CTGGCCTTGT CGAGGAACCT TGGGATAGTT AAGGAAGTGG AAAGAAAAGG GAAGTGGAGT
CTCGACGATT TGCAGGAGGC TGTGAGAGAG CTGGAGAAGG AGATGGGAGG AATTGAGGAT
CTCTGGAAAT CTGCCATAGT AGTTTTGAGT ACAACACTTC AACCCCACAT CCTTGAGAAG
GAGGTTCGGA AAGTGAAAGA ACTTGTCAGG ATCTCAGATG GGGCGTACAC TCTCCCCGAC
TAG
|
|---|
| Protein sequence | MIVQTAADVY LEEADGLLEK GDVVQASEKY YKAAEEAVKL LALSRNLGIV KEVERKGKWS
LDDLQEAVRE LEKEMGGIED LWKSAIVVLS TTLQPHILEK EVRKVKELVR ISDGAYTLPD
|
|---|
| |