| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1756 |
|---|
| Symbol | |
|---|
| ID | 5104756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1693097 |
|---|
| End bp | 1693492 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640507651 |
|---|
| Product | translation initiation factor IF-5A |
|---|
| Protein accession | YP_001191835 |
|---|
| Protein GI | 146304519 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00037] translation initiation factor eIF-5A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.455468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.26313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATAA ATTACTCCAC AGTTGGTGAA ATGAAAGAAG GTAGCTACAT AGTTATAGAT
GGAGAGCCCT GCAGAGTAGT AGAGGTTACC AAGGCCAAGA CTGGAAAGCA CGGAAGCGCT
AAGGCTAACA TAATCGCAGT CAGCATCTTC ACTGGGGCTA AAAAGACCCT CATGGCTCCA
GTGGACTCAA CAGTGGAAGT GCCCATCATT GAGAAACGCA TGGGACAGGT AATCTCCAAT
GTTGGAGACA AGGTTCAGAT CATGGATCTC GAGACGTATG AAACCTTTGA GATAGACATG
CCCACCGAGG AGGATGTGGC CAGCAAGATA AAGAAGGACG CCGAGGTGGA GTATTGGGAA
GTAATGGGAA GGAAAAAGAT AGTCAGGGTA AAGTAA
|
|---|
| Protein sequence | MGINYSTVGE MKEGSYIVID GEPCRVVEVT KAKTGKHGSA KANIIAVSIF TGAKKTLMAP
VDSTVEVPII EKRMGQVISN VGDKVQIMDL ETYETFEIDM PTEEDVASKI KKDAEVEYWE
VMGRKKIVRV K
|
|---|
| |