| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1725 |
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| Symbol | |
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| ID | 5105088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1663525 |
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| End bp | 1664424 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507620 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001191804 |
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| Protein GI | 146304488 |
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| COG category | [K] Transcription |
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| COG ID | [COG1395] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCTG GAATGTTGGA CGAGGTATTA GACGTTTTAG AGAGGGAAGG CATAAGTTAC
ACCCTAATAG AGTATCCAGA GAAGAACAGG AAGTCCATAG ATATAATCGC GAGAGGGAAG
CAGAGAAGGT TCGTGATAAA GATATCCAAC GATAGGCCCT CTAAGGAAGA GACCAGAGAT
CTCAAGAACT TCTCAGCAGT GGTGGGGAGT ATGCCCGTAA TGGTAACCGA TGATACAGAG
GAGGATATAG CAATAGGTAA GGACAACGTA ATTGGGTTAT CGGTGGAGGG CCTGGCGAAG
GCCTTAAGGG GAGAGAAGAT TTTCATCTAT AGGACTCGGG GAGGAATATT CATCAAGATT
AGGTCAGACG TTCTCCGAAG GAAAAGGACA GAAATGAACT ACAGCATGGG AGACCTATCT
AAGATTCTAG GCGTGACCAG GAAAACGATT TATGATTATG AAAATGGAGA GTCAGATGTG
TCCATAGAGG TTGCTGAGAA GCTAATTGAT CTCTTTGGGG ATGAGGTCAT AGGCGATGTA
TGCGATGATG CGCTTCCTAA GCTAGAGCCG GATTCCCAAC CAACAGATAC GATTAGTTCG
AGGATAGCCA AGAATCTAAC TGACGCCGGA TTCGCCTCAG CTCCCATTAG GTTCACGGCG
GTAGATGTTG TCGCCTCAAG GGGTTTGAAA AAAGTCTTGG TTACGGTGGA GCCTAAGAAT
CAAGATCAAC TAGAAAAGAA ACTAAGAGAA GCTTCTAAAA TAGCCAACGA GTTAATGTCC
GAACTTGTGA TAGTGGTCAA GAGCGCCTCT ATGGCGAAGA GGCTGGATAA GGATGGGTTT
AAAATCCTGA CCTCAGAAAG CATCGACAGC CTCAGCGATG AAATTAACAG AAGTGATTGA
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| Protein sequence | MIPGMLDEVL DVLEREGISY TLIEYPEKNR KSIDIIARGK QRRFVIKISN DRPSKEETRD
LKNFSAVVGS MPVMVTDDTE EDIAIGKDNV IGLSVEGLAK ALRGEKIFIY RTRGGIFIKI
RSDVLRRKRT EMNYSMGDLS KILGVTRKTI YDYENGESDV SIEVAEKLID LFGDEVIGDV
CDDALPKLEP DSQPTDTISS RIAKNLTDAG FASAPIRFTA VDVVASRGLK KVLVTVEPKN
QDQLEKKLRE ASKIANELMS ELVIVVKSAS MAKRLDKDGF KILTSESIDS LSDEINRSD
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