Gene Msed_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1721 
Symbol 
ID5105084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1660918 
End bp1661091 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content47% 
IMG OID640507616 
Product30S ribosomal protein S30e 
Protein accessionYP_001191800 
Protein GI146304484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.648169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTC ACGGTTCGTT AACAAAGGCC GGGAAGGTTA GGGGACAAAC CCCAAAGATC 
CAAGCTAAGG AGAGACACAA GGAAGTTCCT AGGGTCAGGA ATAGAATAGA GTATGAGAAG
AGAGTACTCA AGCAAACGGC TCAGAAGCAA CAACGTGCAC CAAGAAGGAT GTAA
 
Protein sequence
MPSHGSLTKA GKVRGQTPKI QAKERHKEVP RVRNRIEYEK RVLKQTAQKQ QRAPRRM