Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1717 |
Symbol | |
ID | 5105080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1656304 |
End bp | 1656627 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640507612 |
Product | hypothetical protein |
Protein accession | YP_001191796 |
Protein GI | 146304480 |
COG category | [R] General function prediction only |
COG ID | [COG2522] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCAA TTATTGCAAC TAAGCTTGTG AAGGATAAGG GATATCCACT GTACAGGGCA GCTTTACTTA TGGGAATTAC TCCAGCGGCA GTTGCCAATT ATATGAATGG TAAAAGGGGC ACAGCAGTGA AAAGCATCAT TGAGAAGGAT CCCAGGCTCA TGGAGATGAT TGGTGATCTA GTTGATAAGA TAAGTTCCTC TGGGGGTAGC ACCCAGCTCT CAAGCTATTA CTGTATACTT TGTGCCGAAG GGAAGAAGGC GCTGAAGAGA AACGGGATCT CTCTCCCCTC TTGCCTTTAC GAAACTAATC TCATGCTGAA ATAA
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Protein sequence | MRSIIATKLV KDKGYPLYRA ALLMGITPAA VANYMNGKRG TAVKSIIEKD PRLMEMIGDL VDKISSSGGS TQLSSYYCIL CAEGKKALKR NGISLPSCLY ETNLMLK
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