Gene Msed_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1717 
Symbol 
ID5105080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1656304 
End bp1656627 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content44% 
IMG OID640507612 
Producthypothetical protein 
Protein accessionYP_001191796 
Protein GI146304480 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAA TTATTGCAAC TAAGCTTGTG AAGGATAAGG GATATCCACT GTACAGGGCA 
GCTTTACTTA TGGGAATTAC TCCAGCGGCA GTTGCCAATT ATATGAATGG TAAAAGGGGC
ACAGCAGTGA AAAGCATCAT TGAGAAGGAT CCCAGGCTCA TGGAGATGAT TGGTGATCTA
GTTGATAAGA TAAGTTCCTC TGGGGGTAGC ACCCAGCTCT CAAGCTATTA CTGTATACTT
TGTGCCGAAG GGAAGAAGGC GCTGAAGAGA AACGGGATCT CTCTCCCCTC TTGCCTTTAC
GAAACTAATC TCATGCTGAA ATAA
 
Protein sequence
MRSIIATKLV KDKGYPLYRA ALLMGITPAA VANYMNGKRG TAVKSIIEKD PRLMEMIGDL 
VDKISSSGGS TQLSSYYCIL CAEGKKALKR NGISLPSCLY ETNLMLK